Basic Information:

  VIRBase ID:  

VHID00602435

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-1-3p:  MIMAT0005543          Plekhg3:  NM_153804     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-1-3p	Plekhg3
miRBase Accession/Entrez ID	MIMAT0005543	263406
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	BC030417

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plekhg3	chr12:76533578-76533579(+) m6A 5'UTR       25412662 chr12:76533612-76533613(+) m6A 5'UTR       25412662 chr12:76533670-76533671(+) m6A 5'UTR       25412662 chr12:76533738-76533739(+) m6A 5'UTR       25412662 chr12:76560314-76560315(+) m6A CDS       25412662 chr12:76560330-76560331(+) m6A CDS       25412662 chr12:76560375-76560376(+) m6A CDS       25412662 chr12:76560385-76560386(+) m6A CDS       25412662 chr12:76560416-76560417(+) m6A CDS       25683224//25412662 chr12:76560476-76560477(+) m6A CDS       25683224 chr12:76560498-76560499(+) m6A CDS       25683224//22608085 chr12:76562237-76562238(+) m6A CDS       25683224//22608085 chr12:76562275-76562276(+) m6A CDS       25683224//22608085 chr12:76562299-76562300(+) m6A CDS       25683224//22608085 chr12:76563768-76563769(+) m6A CDS       25683224//22608085 chr12:76563774-76563775(+) m6A CDS       25683224//22608085 chr12:76564829-76564830(+) m6A CDS       - chr12:76564834-76564835(+) m6A CDS       - chr12:76565521-76565522(+) m6A CDS       25412662//22608085 chr12:76565552-76565553(+) m6A CDS       25412662//22608085 chr12:76565808-76565809(+) m6A CDS       25683224//25412662//22608085 chr12:76571613-76571614(+) m6A CDS       25683224//25412662//24981863 chr12:76572422-76572423(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76572522-76572523(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76573254-76573255(+) m6A CDS       25683224//25412662//24981863 chr12:76575862-76575863(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76575938-76575939(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr12:76575964-76575965(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576001-76576002(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576022-76576023(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576049-76576050(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576139-76576140(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576231-76576232(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576316-76576317(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576361-76576362(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76576373-76576374(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76576396-76576397(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76576434-76576435(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576439-76576440(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576484-76576485(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576499-76576500(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576511-76576512(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76576699-76576700(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:76576726-76576727(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr12:76576739-76576740(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr12:76576831-76576832(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76576902-76576903(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76577087-76577088(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:76577114-76577115(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:76577159-76577160(+) m6A CDS       25683224//25456834//24981863//25569111 chr12:76577763-76577764(+) m6A CDS       25683224//25412662//24981863//25569111 chr12:76577811-76577812(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr12:76577871-76577872(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76577928-76577929(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76577995-76577996(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578005-76578006(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578028-76578029(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578046-76578047(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578151-76578152(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76578166-76578167(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:76578232-76578233(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578272-76578273(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578317-76578318(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578331-76578332(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578340-76578341(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578346-76578347(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578367-76578368(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578394-76578395(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578427-76578428(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578450-76578451(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578547-76578548(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:76578632-76578633(+) Y 3'UTR//exon       26075521 chr12:76578746-76578747(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:76578759-76578760(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:76578810-76578811(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr12:76578933-76578934(+) m6A 3'UTR       25456834//24981863 chr12:76578990-76578991(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Plekhg3	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-1-3p
Interactor2: Plekhg3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar