Basic Information:

  VIRBase ID:  

VHID00602139

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-1-3p:  MIMAT0005543          Fam53a:  NM_001359462     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-1-3p	Fam53a
miRBase Accession/Entrez ID	MIMAT0005543	74504
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2410018C17Rik//5430419M09Rik//DN//Dntnp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam53a	chr5:33600575-33600576(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:33600593-33600594(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:33600608-33600609(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:33600641-33600642(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:33600656-33600657(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:33600810-33600811(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:33600845-33600846(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:33600869-33600870(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:33600879-33600880(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:33600959-33600960(-) m6A 3'UTR//intron       25683224//25456834//24981863 chr5:33607482-33607483(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:33607498-33607499(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:33607709-33607710(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111 chr5:33607942-33607943(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:33608000-33608001(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:33608067-33608068(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:33614831-33614832(-) m6A 5'UTR//exon       25569111 chr5:33628858-33628859(-) m6A 5'UTR//exon//intron       25569111 chr5:33629019-33629020(-) m6A 5'UTR//intron       24981863 chr5:33629055-33629056(-) m6A 5'UTR//intron       24981863 chr5:33629202-33629203(-) m6A 5'UTR//intron       25412662 chr5:33629249-33629250(-) m6A 5'UTR//intron       25412662 chr5:33629266-33629267(-) m6A 5'UTR//intron       25412662 chr5:33629373-33629374(-) m6A 5'UTR//exon       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-1-3p
Interactor2: Fam53a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar