Basic Information:

  VIRBase ID:  

VHID00601842

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-1-3p:  MIMAT0005543          Sin3a:  NM_001110351     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-1-3p	Sin3a
miRBase Accession/Entrez ID	MIMAT0005543	20466
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AW553200//mKIAA4126//mS//mSin3A//S//Sin3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sin3a	chr9:57072042-57072043(+) m6A 5'UTR       24981863//25569111 chr9:57081182-57081183(+) m6A 5'UTR//intron       25569111 chr9:57081199-57081200(+) m6A 5'UTR//intron       25569111 chr9:57086750-57086751(+) m6A CDS       25569111//22608085 chr9:57095410-57095411(+) m6A CDS//exon       25683224//25412662//24981863 chr9:57096760-57096761(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr9:57096838-57096839(+) m6A CDS//exon       24981863 chr9:57096857-57096858(+) m6A CDS//exon       24981863 chr9:57096911-57096912(+) m6A CDS//exon       24981863 chr9:57104787-57104788(+) m6A CDS       22608085 chr9:57107415-57107416(+) m6A CDS       22608085 chr9:57107439-57107440(+) m6A CDS       22608085 chr9:57107558-57107559(+) m6A CDS       22608085 chr9:57110648-57110649(+) m6A CDS       25683224//24981863//25569111 chr9:57110704-57110705(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:57110723-57110724(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:57111062-57111063(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:57111107-57111108(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:57111147-57111148(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:57117544-57117545(+) m6A CDS//exon       22608085 chr9:57118121-57118122(+) m6A CDS//exon       22608085 chr9:57118136-57118137(+) m6A CDS//exon       22608085 chr9:57118168-57118169(+) m6A CDS//intron       22608085 chr9:57119102-57119103(+) m6A CDS//exon       22608085 chr9:57119145-57119146(+) m6A CDS//exon       22608085 chr9:57119154-57119155(+) m6A CDS//exon       22608085 chr9:57119169-57119170(+) m6A CDS//exon       22608085 chr9:57125236-57125237(+) m6A CDS       25683224//24981863//25569111 chr9:57125247-57125248(+) m6A CDS       25683224//24981863//25569111 chr9:57125299-57125300(+) m6A CDS       25683224//24981863//25569111 chr9:57125335-57125336(+) m6A CDS       25683224//24981863//25569111 chr9:57125352-57125353(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:57127207-57127208(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:57127243-57127244(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:57127312-57127313(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:57127578-57127579(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:57127608-57127609(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:57127643-57127644(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:57127858-57127859(+) m6A 3'UTR       24981863//25569111 chr9:57127985-57127986(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-1-3p
Interactor2: Sin3a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar