Basic Information:

  VIRBase ID:  

VHID00601556

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Lemd3:  NM_001081193     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Lemd3
miRBase Accession/Entrez ID	MIMAT0005541	380664
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI316861//Ma//Man1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lemd3	chr10:120925035-120925036(-) m6A 3'UTR       24981863//25569111 chr10:120925080-120925081(-) m6A 3'UTR       24981863//25569111 chr10:120925087-120925088(-) m6A 3'UTR       25683224//24981863//25569111 chr10:120925284-120925285(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr10:120925370-120925371(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:120925424-120925425(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:120925450-120925451(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:120925458-120925459(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:120949324-120949325(-) m6A CDS       25456834//24981863 chr10:120952234-120952235(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:120952248-120952249(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:120977787-120977788(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:120977835-120977836(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:120977946-120977947(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:120977987-120977988(-) m6A CDS       25683224//24981863//25569111 chr10:120978140-120978141(-) m6A CDS       25683224//24981863//25456834//25569111//22608085 chr10:120978178-120978179(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr10:120978250-120978251(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978316-120978317(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978328-120978329(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978392-120978393(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978495-120978496(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978550-120978551(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:120978646-120978647(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr10:120978853-120978854(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr10:120979051-120979052(-) m6A CDS       25456834//25412662//24981863//25569111 chr10:120979105-120979106(-) m6A CDS       25456834//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Lemd3	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Lemd3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar