Detail Information

Basic Information:


  VIRBase ID:  

VHID00601133

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:           Kri1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m22-1 Kri1
miRBase
Accession/Entrez ID		 MIMAT0005541 215194
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Kri1
chr9:21273533-21273534(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr9:21273541-21273542(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr9:21273656-21273657(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr9:21273682-21273683(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr9:21273690-21273691(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr9:21273699-21273700(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr9:21273704-21273705(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr9:21273777-21273778(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:21273873-21273874(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr9:21273938-21273939(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr9:21274010-21274011(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr9:21274141-21274142(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr9:21274156-21274157(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr9:21275313-21275314(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr9:21275383-21275384(-) m6A exon//intron       25683224//25412662//25569111
chr9:21275449-21275450(-) m6A CDS       25683224//25412662
chr9:21275477-21275478(-) m6A CDS       25683224//25412662
chr9:21275919-21275920(-) m6A CDS       25683224//25412662//25569111
chr9:21275928-21275929(-) m6A CDS       25683224//25412662//25569111
chr9:21275965-21275966(-) m6A CDS       25683224//25412662
chr9:21275970-21275971(-) m6A CDS       25683224//25412662//24981863
chr9:21276170-21276171(-) m6A CDS       25683224//25412662//24981863
chr9:21276397-21276398(-) m6A CDS       25683224//25412662//24981863
chr9:21276444-21276445(-) m6A CDS       25683224//25412662//24981863
chr9:21276457-21276458(-) m6A CDS       25683224//25412662//24981863
chr9:21276463-21276464(-) m6A CDS       25683224//25412662//24981863
chr9:21279038-21279039(-) m6A exon//intron       25683224//25412662
chr9:21279125-21279126(-) m6A exon//intron       25683224//25412662
chr9:21279406-21279407(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21279428-21279429(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21279490-21279491(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21279501-21279502(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21280252-21280253(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21280333-21280334(-) m6A exon//intron       25683224//25412662//24981863
chr9:21280404-21280405(-) m6A CDS//exon       25683224//24981863
chr9:21280411-21280412(-) m6A CDS//exon       25683224//24981863
chr9:21281121-21281122(-) m6A CDS//exon       25683224//25412662//24981863//25456834
chr9:21281131-21281132(-) m6A CDS//exon       25683224//25412662//24981863//25456834
chr9:21281136-21281137(-) m6A CDS//exon       25683224//25412662//24981863//25456834
chr9:21281146-21281147(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21281168-21281169(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21281185-21281186(-) m6A exon//intron       25683224//25412662//24981863
chr9:21281199-21281200(-) m6A exon//intron       25683224//25412662//24981863
chr9:21281319-21281320(-) m6A exon//intron       25412662
chr9:21281664-21281665(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21281686-21281687(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21281692-21281693(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21281722-21281723(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21281744-21281745(-) m6A exon//intron       25683224//25456834//25412662//24981863
chr9:21281875-21281876(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21281890-21281891(-) m6A CDS//exon       25683224//25456834//25412662//24981863
chr9:21282022-21282023(-) m6A exon//intron       25683224//25412662//24981863
chr9:21282062-21282063(-) m6A CDS//exon       25683224//24981863
chr9:21282094-21282095(-) m6A CDS//exon       25683224//24981863
chr9:21282163-21282164(-) m6A exon//intron       25683224//25412662//24981863
chr9:21282193-21282194(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21282210-21282211(-) m6A CDS//exon       25683224//25412662//24981863
chr9:21285273-21285274(-) m6A CDS//exon       25412662//24981863
chr9:21286581-21286582(-) m6A 5'UTR//CDS//exon       25412662
chr9:21286622-21286623(-) m6A 5'UTR//CDS//exon       25412662//25569111
chr9:21286647-21286648(-) m6A 5'UTR//CDS//exon       25412662//25569111
chr9:21286658-21286659(-) m6A 5'UTR//CDS//exon       25569111
chr9:21287532-21287533(-) m6A exon//intron       25569111
chr9:21287791-21287792(-) m6A 5'UTR//intron       25569111
chr9:21287820-21287821(-) m6A 5'UTR//intron       25569111
chr9:21287869-21287870(-) m6A 5'UTR//CDS//exon       24981863//25569111
chr9:21287944-21287945(-) m6A 5'UTR//CDS//exon       24981863//25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Kri1
Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m22-1
Interactor2: Kri1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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