Basic Information:

  VIRBase ID:  

VHID00601033

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Il17rd:  NM_134437     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Il17rd
miRBase Accession/Entrez ID	MIMAT0005541	171463
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810004A10Rik//AI428510//Se//Sef//Sef-S

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Il17rd	chr14:27039039-27039040(+) m6A 5'UTR       25412662//25569111 chr14:27039075-27039076(+) m6A 5'UTR       25412662//25569111 chr14:27039212-27039213(+) m6A CDS       25412662 chr14:27076372-27076373(+) m6A CDS       25412662 chr14:27076379-27076380(+) m6A CDS       25412662 chr14:27082708-27082709(+) m6A CDS       25683224 chr14:27087456-27087457(+) m6A CDS       25683224 chr14:27093448-27093449(+) m6A CDS       - chr14:27099618-27099619(+) m6A CDS       25683224//25412662//25569111 chr14:27099625-27099626(+) m6A CDS       25683224//25412662//25569111 chr14:27099795-27099796(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:27099822-27099823(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:27099906-27099907(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27100093-27100094(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr14:27100200-27100201(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:27100206-27100207(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:27100299-27100300(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:27100360-27100361(+) m6A CDS       25456834//25569111 chr14:27100382-27100383(+) m6A CDS       25456834//25569111 chr14:27101285-27101286(+) m6A CDS       25456834//25569111 chr14:27101334-27101335(+) m6A CDS       25456834//24981863//25569111 chr14:27101361-27101362(+) m6A CDS       25456834//24981863//25569111 chr14:27101388-27101389(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr14:27101590-27101591(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27101638-27101639(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27101683-27101684(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27101737-27101738(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27101752-27101753(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27101824-27101825(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr14:27101870-27101871(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101897-27101898(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101917-27101918(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101928-27101929(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101954-27101955(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101979-27101980(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27101994-27101995(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27102014-27102015(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27102038-27102039(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27102069-27102070(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27102190-27102191(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:27103320-27103321(+) m6A 3'UTR       25412662 chr14:27103689-27103690(+) m6A 3'UTR       25412662//24981863 chr14:27106477-27106478(+) m6A 3'UTR       24981863//25569111 chr14:27106535-27106536(+) m6A 3'UTR       24981863//25569111 chr14:27106546-27106547(+) m6A 3'UTR       24981863//25569111 chr14:27106638-27106639(+) m6A 3'UTR       24981863//25569111 chr14:27106719-27106720(+) m6A 3'UTR       25683224//24981863 chr14:27106767-27106768(+) m6A 3'UTR       25683224//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Il17rd	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Il17rd

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar