Basic Information:

  VIRBase ID:  

VHID00600957

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Lgr4:  NM_172671     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Lgr4
miRBase Accession/Entrez ID	MIMAT0005541	107515
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9130225G07//A330106J01Rik//A930009A08Rik//Gpr//Gpr48

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lgr4	chr2:109917695-109917696(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:109917805-109917806(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr2:109917919-109917920(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr2:109917955-109917956(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr2:109917982-109917983(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr2:109918244-109918245(+) m6A CDS       25683224//25412662//25569111 chr2:109970705-109970706(+) m6A CDS//intron       25569111 chr2:110008627-110008628(+) m6A CDS       25569111//22608085 chr2:110011510-110011511(+) m6A CDS       25456834//24981863//25569111 chr2:110011771-110011772(+) m6A CDS       25456834//24981863//25569111//22608085 chr2:110011811-110011812(+) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr2:110011851-110011852(+) m6A CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr2:110011877-110011878(+) m6A CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr2:110011889-110011890(+) m6A CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr2:110011937-110011938(+) m6A CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr2:110012136-110012137(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012184-110012185(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012274-110012275(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012289-110012290(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012423-110012424(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012522-110012523(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012527-110012528(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:110012613-110012614(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:110012723-110012724(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:110012887-110012888(+) m6A 3'UTR       25569111 chr2:110012929-110012930(+) m6A 3'UTR       25569111 chr2:110013008-110013009(+) m6A 3'UTR       - chr2:110013041-110013042(+) m6A 3'UTR       -

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Lgr4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar