Detail Information

Basic Information:


  VIRBase ID:  

VHID00600825

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:           Med8:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m22-1 Med8
miRBase
Accession/Entrez ID
MIMAT0005541 80509
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 2210021A15Rik//AB041805//ARC//ARC32

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Med8
chr4:118409341-118409342(+) m6A 5'UTR       25683224//25412662//24981863//25569111//22575960
chr4:118409440-118409441(+) m6A 5'UTR//intron       25683224//25412662//24981863//25456834//25569111
chr4:118410350-118410351(+) m6A exon//intron       25683224//25412662//24981863//25569111
chr4:118410816-118410817(+) m6A exon//intron       24981863
chr4:118410867-118410868(+) m6A exon//intron       24981863
chr4:118412697-118412698(+) m6A CDS//exon       24981863//22608085
chr4:118413638-118413639(+) m6A CDS//exon       24981863//22608085
chr4:118413646-118413647(+) m6A CDS//exon       24981863//22608085
chr4:118413662-118413663(+) m6A CDS//exon       24981863//22608085
chr4:118414038-118414039(+) m6A exon//intron       25456834//24981863
chr4:118414746-118414747(+) m6A CDS       25456834//24981863//25569111
chr4:118414874-118414875(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960
chr4:118414886-118414887(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960
chr4:118414906-118414907(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960
chr4:118414940-118414941(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:118415050-118415051(+) m6A 3'UTR       25456834//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m22-1
Interactor2: Med8

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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