Basic Information:

  VIRBase ID:  

VHID00600662

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Ssbp3:  NM_023672     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Ssbp3
miRBase Accession/Entrez ID	MIMAT0005541	72475
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610021L12Rik//2610200M23Rik//5730488C10Rik//AI854733//AW551939//LAST//SSDP1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ssbp3	chr4:106911496-106911497(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr4:106911800-106911801(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr4:107028247-107028248(+) m6A CDS//exon//intron       25412662//22608085 chr4:107030882-107030883(+) m6A CDS//exon       25412662//22608085 chr4:107031050-107031051(+) m6A CDS//exon       25412662 chr4:107036955-107036956(+) m6A CDS//exon       25412662 chr4:107037059-107037060(+) m6A exon//intron       25412662 chr4:107037069-107037070(+) m6A exon//intron       25412662 chr4:107037619-107037620(+) m6A CDS//exon       24981863 chr4:107038248-107038249(+) m6A CDS//exon       24981863 chr4:107038727-107038728(+) m6A CDS//exon       24981863 chr4:107038755-107038756(+) m6A CDS//exon       24981863 chr4:107047260-107047261(+) m6A CDS//exon       24981863 chr4:107047436-107047437(+) m6A CDS//exon       24981863//25569111 chr4:107048222-107048223(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048238-107048239(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048247-107048248(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048252-107048253(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048286-107048287(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048313-107048314(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942 chr4:107048575-107048576(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:107048680-107048681(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:107048685-107048686(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:107048733-107048734(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:107048739-107048740(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:107048846-107048847(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107048874-107048875(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22608085 chr4:107048929-107048930(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr4:107049210-107049211(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107049219-107049220(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107049265-107049266(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107049302-107049303(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107049310-107049311(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:107049400-107049401(+) m6A 3'UTR       25683224//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Ssbp3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar