Basic Information:

  VIRBase ID:  

VHID00600641

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Borcs6:  NM_028005     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Borcs6
miRBase Accession/Entrez ID	MIMAT0005541	71923
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2310047M10Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Borcs6	chr11:69059986-69059987(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060023-69060024(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060035-69060036(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060305-69060306(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060370-69060371(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060632-69060633(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:69060700-69060701(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:69060719-69060720(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:69060740-69060741(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:69060899-69060900(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060919-69060920(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:69060935-69060936(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr11:69060968-69060969(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:69061165-69061166(+) m6A 3'UTR       25683224//25456834//24981863 chr11:69061217-69061218(+) m6A 3'UTR       25683224//24981863 chr11:69061239-69061240(+) m6A 3'UTR       25683224//24981863 chr11:69061306-69061307(+) m6A 3'UTR       25683224//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Borcs6	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Borcs6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar