Basic Information:

  VIRBase ID:  

VHID00600563

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Qrich1:  NM_175143     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Qrich1
miRBase Accession/Entrez ID	MIMAT0005541	69232
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610028H07Rik//b2b2404C//b2b2404Clo

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Qrich1	chr9:108427266(+) A-I      intronic chr9:108459845(+) A-I      intronic chr9:108429689(+) A-I      intronic chr9:108459848(+) A-I      intronic chr9:108426351(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Qrich1	chr9:108524020(+) A-I intron -    22524474 chr9:108524935(+) A-I intron -    22524474 chr9:108527358(+) A-I intron -    22524474 chr9:108557514(+) A-I intron -    22524474 chr9:108557517(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Qrich1	chr9:108517170-108517171(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr9:108517868-108517869(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr9:108517918-108517919(+) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr9:108517971-108517972(+) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr9:108518012-108518013(+) m6A exon//intron       25683224//24981863 chr9:108518742-108518743(+) m6A 5'UTR//exon//intron       24981863 chr9:108518785-108518786(+) m6A 5'UTR//exon//intron       25683224//24981863 chr9:108518792-108518793(+) m6A 5'UTR//exon//intron       25683224//24981863 chr9:108518803-108518804(+) m6A 5'UTR//exon//intron       25683224//24981863 chr9:108528431-108528432(+) m6A 5'UTR//intron       25683224 chr9:108528452-108528453(+) m6A 5'UTR//intron       25683224 chr9:108528542-108528543(+) m6A 5'UTR//intron       24981863//25569111 chr9:108528590-108528591(+) m6A 5'UTR//exon       25683224//24981863//25569111 chr9:108528599-108528600(+) m6A 5'UTR//exon       25683224//24981863//25569111 chr9:108528628-108528629(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr9:108528703-108528704(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:108528722-108528723(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:108528750-108528751(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108528787-108528788(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108528802-108528803(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108528833-108528834(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108528870-108528871(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108528953-108528954(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr9:108530607-108530608(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr9:108533736-108533737(+) m6A CDS//intron       25683224//25412662//24981863//25456834//25569111 chr9:108533922-108533923(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108534031-108534032(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534133-108534134(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534148-108534149(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr9:108534177-108534178(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr9:108534201-108534202(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr9:108534207-108534208(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr9:108534388-108534389(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534411-108534412(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534421-108534422(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534513-108534514(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534529-108534530(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534555-108534556(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108534570-108534571(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108541693-108541694(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:108541799-108541800(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:108541810-108541811(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:108541824-108541825(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:108541844-108541845(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:108542537-108542538(+) m6A CDS       25683224//22608085 chr9:108545031-108545032(+) m6A 3'UTR//intron       25683224//22608085 chr9:108556471-108556472(+) m6A CDS//exon       25569111//22608085 chr9:108556546-108556547(+) m6A CDS//exon       25569111//22608085 chr9:108556930-108556931(+) m6A exon//intron       24981863//22608085 chr9:108556983-108556984(+) m6A CDS//exon       24981863//22608085 chr9:108559350-108559351(+) m6A CDS//exon       25683224//24981863//25569111 chr9:108559359-108559360(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr9:108559473-108559474(+) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr9:108559478-108559479(+) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr9:108559608-108559609(+) m6A 3'UTR       24981863//25569111 chr9:108559642-108559643(+) m6A 3'UTR       24981863//25569111 chr9:108559714-108559715(+) m6A 3'UTR       25683224//25412662//24981863 chr9:108559720-108559721(+) m6A 3'UTR       25683224//25412662//24981863 chr9:108559739-108559740(+) m6A 3'UTR       25683224//25412662//24981863 chr9:108559803-108559804(+) m6A 3'UTR       25683224//25412662//24981863 chr9:108559869-108559870(+) m6A 3'UTR       24981863 chr9:108559875-108559876(+) m6A 3'UTR       24981863 chr9:108559908-108559909(+) m6A 3'UTR       24981863//26404942 chr9:108559932-108559933(+) m6A 3'UTR       24981863//26404942 chr9:108559986-108559987(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Qrich1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar