Basic Information:

  VIRBase ID:  

VHID00600403

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Cxcl16:  NM_023158     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Cxcl16
miRBase Accession/Entrez ID	MIMAT0005541	66102
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	0910001K24Rik//AV290116//b2b498C//b2b498Clo//BB024863//CXCL16v1//CXCL16v2//SR//SR-PSOX//Zmynd15

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cxcl16	chr11:70454030-70454031(-) m6A 3'UTR       24981863 chr11:70454073-70454074(-) m6A 3'UTR       24981863 chr11:70454101-70454102(-) m6A 3'UTR       24981863 chr11:70454146-70454147(-) m6A 3'UTR       24981863 chr11:70454156-70454157(-) m6A 3'UTR       24981863 chr11:70455200-70455201(-) m6A 3'UTR//exon       24981863 chr11:70455261-70455262(-) m6A 3'UTR//exon       24981863 chr11:70455279-70455280(-) m6A 3'UTR//exon       24981863 chr11:70455896-70455897(-) m6A CDS//exon       25683224//24981863 chr11:70455965-70455966(-) m6A CDS//exon       25683224//24981863 chr11:70455975-70455976(-) m6A CDS//exon       25683224//24981863 chr11:70455996-70455997(-) m6A CDS//exon       24981863 chr11:70456021-70456022(-) m6A CDS//exon       24981863 chr11:70456053-70456054(-) m6A CDS//exon       24981863 chr11:70459538-70459539(-) m6A 5'UTR//exon       24981863//25412662 chr11:70459605-70459606(-) m6A 5'UTR//exon       24981863//25412662 chr11:70459622-70459623(-) m6A 5'UTR//exon       24981863//25412662 chr11:70459720-70459721(-) m6A 5'UTR//exon       24981863//25569111 chr11:70459820-70459821(-) m6A 5'UTR//exon       25683224//25456834//24981863//25569111 chr11:70459844-70459845(-) m6A 5'UTR       25683224//25456834//24981863//25569111 chr11:70459882-70459883(-) m6A 5'UTR       25683224//25456834//24981863//25569111 chr11:70459890-70459891(-) m6A 5'UTR       25683224//25456834//24981863//25569111 chr11:70459961-70459962(-) m6A 5'UTR       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Cxcl16

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar