Basic Information:

  VIRBase ID:  

VHID00599964

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Ppp3r1:  NM_024459     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Ppp3r1
miRBase Accession/Entrez ID	MIMAT0005541	19058
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	CaN//CaNB1//Cnb//Cnb1//MCIP1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppp3r1	chr11:17159417-17159418(+) m6A 5'UTR       25412662//25569111//22608085 chr11:17159471-17159472(+) m6A 5'UTR       25412662//25569111//22608085 chr11:17193124-17193125(+) m6A CDS//exon       22608085 chr11:17194262-17194263(+) m6A CDS//exon       22608085 chr11:17194720-17194721(+) m6A CDS//exon       26404942//22608085 chr11:17194788-17194789(+) m6A CDS//exon       24981863//26404942//22608085 chr11:17194793-17194794(+) m6A CDS//exon       24981863//26404942//22608085 chr11:17198468-17198469(+) m6A 3'UTR       24981863//26404942//22608085 chr11:17198515-17198516(+) m6A 3'UTR       24981863//26404942//22608085 chr11:17199199-17199200(+) m6A 3'UTR       24981863//26404942 chr11:17199256-17199257(+) m6A 3'UTR       24981863//26404942 chr11:17199280-17199281(+) m6A 3'UTR       24981863//26404942 chr11:17199294-17199295(+) m6A 3'UTR       24981863//26404942 chr11:17199321-17199322(+) m6A 3'UTR       24981863//26404942 chr11:17199344-17199345(+) m6A 3'UTR       24981863//26404942 chr11:17200190-17200191(+) m6A 3'UTR       22608085 chr11:17200200-17200201(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ppp3r1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Ppp3r1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar