Basic Information:

  VIRBase ID:  

VHID00599910

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Nrp1:  NM_001358960     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Nrp1
miRBase Accession/Entrez ID	MIMAT0005541	18186
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C530029I03//N//NP//NP-1//NPN-1//Npn1//Nrp

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Nrp1	chr8:131028073(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Nrp1	chr8:128504173(+) C-I intron -    22448268

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nrp1	chr8:128359098-128359099(+) m6A exon       25412662//24981863//25569111 chr8:128359107-128359108(+) m6A exon       25412662//24981863//25569111 chr8:128359269-128359270(+) m6A exon       25683224//25412662//24981863//25569111 chr8:128359301-128359302(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr8:128359361-128359362(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr8:128359426-128359427(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr8:128359457-128359458(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085 chr8:128359540-128359541(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr8:128363232-128363233(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:128363248-128363249(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:128363330-128363331(+) m6A CDS//exon       25683224//24981863//22608085 chr8:128363380-128363381(+) m6A CDS//exon       25683224//22608085 chr8:128363386-128363387(+) m6A CDS//exon       25683224//22608085 chr8:128363411-128363412(+) m6A exon//intron       25683224//22608085 chr8:128418848-128418849(+) m6A CDS//exon       25683224//22608085 chr8:128425759-128425760(+) m6A CDS//exon       25683224//22608085 chr8:128425900-128425901(+) m6A CDS//exon       25683224//22608085 chr8:128434319-128434320(+) m6A CDS//exon       25683224//22608085 chr8:128434339-128434340(+) m6A CDS//exon       25683224//22608085 chr8:128434352-128434353(+) m6A CDS//exon       25683224//22608085 chr8:128460664-128460665(+) m6A CDS//exon       25683224//22608085 chr8:128460694-128460695(+) m6A CDS//exon       25683224//22608085 chr8:128460710-128460711(+) m6A CDS//exon       25683224//22608085 chr8:128468445-128468446(+) m6A CDS       25683224//22608085 chr8:128468526-128468527(+) m6A CDS       25683224//22608085 chr8:128468586-128468587(+) m6A CDS       25683224//25412662//22608085 chr8:128468645-128468646(+) m6A CDS       25683224//25412662//22608085 chr8:128480897-128480898(+) m6A CDS       25683224//25412662//22608085 chr8:128480917-128480918(+) m6A CDS       25683224//25412662//22608085 chr8:128487938-128487939(+) m6A CDS       25683224//22608085 chr8:128493076-128493077(+) m6A CDS       25683224//22608085 chr8:128493139-128493140(+) m6A CDS       25683224//22608085 chr8:128493155-128493156(+) m6A CDS       25683224//22608085 chr8:128497973-128497974(+) m6A CDS       25683224//22608085 chr8:128498038-128498039(+) m6A CDS       25683224//22608085 chr8:128498081-128498082(+) m6A CDS       25683224//22608085 chr8:128498535-128498536(+) m6A CDS       25683224//25569111 chr8:128498592-128498593(+) m6A CDS       25683224//24981863//25569111 chr8:128500630-128500631(+) m6A CDS       25683224//24981863//25569111 chr8:128500645-128500646(+) m6A CDS       25683224//24981863//25569111 chr8:128500668-128500669(+) m6A CDS       25683224//24981863//25569111 chr8:128502566-128502567(+) m6A CDS       25683224//24981863//25569111 chr8:128502598-128502599(+) m6A CDS       25683224//24981863//25569111//22608085//22575960 chr8:128502716-128502717(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502734-128502735(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502747-128502748(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502780-128502781(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502785-128502786(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502833-128502834(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:128502857-128502858(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128502875-128502876(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128502917-128502918(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128503010-128503011(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128503101-128503102(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128503188-128503189(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085//22575960 chr8:128503243-128503244(+) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960 chr8:128503299-128503300(+) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nrp1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Nrp1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar