Detail Information

Basic Information:


  VIRBase ID:  

VHID00599763

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:           Hic1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m22-1 Hic1
miRBase
Accession/Entrez ID
MIMAT0005541 15248
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AA408311//HIC-//HIC-1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Hic1
chr11:75164924-75164925(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:75164974-75164975(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:75165159-75165160(-) m6A 3'UTR       25683224//24981863//25569111//22575960
chr11:75165228-75165229(-) m6A 3'UTR       25412662//24981863//25569111
chr11:75165405-75165406(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165413-75165414(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165418-75165419(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165464-75165465(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165475-75165476(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165552-75165553(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165584-75165585(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165607-75165608(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:75165691-75165692(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960
chr11:75165936-75165937(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75165999-75166000(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166028-75166029(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166084-75166085(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166109-75166110(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166231-75166232(-) m6A CDS       25412662//24981863//25569111
chr11:75166358-75166359(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166374-75166375(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166549-75166550(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166636-75166637(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166667-75166668(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75166792-75166793(-) m6A CDS       25683224//25412662//24981863//25569111
chr11:75167285-75167286(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085//22575960
chr11:75167327-75167328(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085//22575960
chr11:75167333-75167334(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085//22575960
chr11:75167516-75167517(-) m6A CDS//exon       25412662//24981863//25569111
chr11:75167910-75167911(-) m6A exon//intron       25412662//24981863//25569111
chr11:75167944-75167945(-) m6A exon//intron       25412662//25569111
chr11:75169105-75169106(-) m6A CDS       25412662//24981863//25569111
chr11:75169114-75169115(-) m6A CDS       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m22-1
Interactor2: Hic1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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