Basic Information:

  VIRBase ID:  

VHID00599679

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m22-1:  MIMAT0005541          Nr2f1:  NM_001347539     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m22-1	Nr2f1
miRBase Accession/Entrez ID	MIMAT0005541	13865
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	COUP-//COUP-T//COUP-TF1//COUP-TFI//COUPTFA//EAR-3//EAR3//Erb//Erbal3//SVP44//Tcfcou//Tcfcoup1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nr2f1	chr13:78189213-78189214(-) m6A 3'UTR       25683224//24981863//26404942 chr13:78189223-78189224(-) m6A 3'UTR       25683224//24981863//26404942 chr13:78189240-78189241(-) m6A 3'UTR       25683224//24981863//26404942 chr13:78189298-78189299(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr13:78189309-78189310(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr13:78189327-78189328(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr13:78189346-78189347(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr13:78189395-78189396(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189423-78189424(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189484-78189485(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189533-78189534(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189549-78189550(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189591-78189592(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189627-78189628(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:78189660-78189661(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:78189677-78189678(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:78189686-78189687(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:78189731-78189732(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:78189803-78189804(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr13:78189815-78189816(-) m6A CDS       25683224//24981863//25569111//22608085 chr13:78189897-78189898(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr13:78190279-78190280(-) m6A exon//intron       25683224//25412662//24981863 chr13:78190329-78190330(-) m6A exon//intron       25683224//25412662 chr13:78190350-78190351(-) m6A exon//intron       25412662 chr13:78195240-78195241(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78195262-78195263(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78195283-78195284(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78195412-78195413(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78195499-78195500(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78195897-78195898(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr13:78195908-78195909(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr13:78198202-78198203(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr13:78198232-78198233(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr13:78198310-78198311(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78198376-78198377(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:78198422-78198423(-) m6A CDS       25412662//24981863//25569111 chr13:78198837-78198838(-) m6A 5'UTR       25412662//24981863 chr13:78198846-78198847(-) m6A 5'UTR       25412662//24981863 chr13:78199379-78199380(-) m6A 5'UTR       25412662//24981863//25569111 chr13:78199448-78199449(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr13:78199471-78199472(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr13:78199548-78199549(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085 chr13:78199561-78199562(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085 chr13:78199671-78199672(-) m6A 5'UTR       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nr2f1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m22-1
Interactor2: Nr2f1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar