Detail Information

Basic Information:


  VIRBase ID:  

VHID00599507

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Palm2
miRBase
Accession/Entrez ID		 MIMAT0005540 Palm2
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Palm2
chr4:57568238-57568239(+) m6A 5'UTR//intron       25569111
chr4:57637861-57637862(+) m6A intron       24981863
chr4:57638062-57638063(+) m6A CDS//exon       25412662//24981863//25569111
chr4:57648037-57648038(+) m6A CDS//exon       25412662//24981863//25569111
chr4:57688490-57688491(+) m6A CDS//exon       24981863//25412662//25569111
chr4:57688519-57688520(+) m6A CDS//exon       24981863//25569111
chr4:57709483-57709484(+) m6A 3'UTR//CDS//exon       24981863//25569111
chr4:57709491-57709492(+) m6A 3'UTR//CDS       24981863//25569111
chr4:57709500-57709501(+) m6A 3'UTR//CDS       24981863//25569111
chr4:57709676-57709677(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085
chr4:57709694-57709695(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085
chr4:57709710-57709711(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085
chr4:57709748-57709749(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085
chr4:57709816-57709817(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111
chr4:57709864-57709865(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111
chr4:57709906-57709907(+) m6A 3'UTR//CDS       25412662//24981863//25569111
chr4:57709926-57709927(+) m6A 3'UTR//CDS       25412662//24981863//25569111
chr4:57709953-57709954(+) m6A 3'UTR//CDS       25412662//24981863//25569111
chr4:57710013-57710014(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085
chr4:57710080-57710081(+) m6A 3'UTR//CDS       25412662//24981863//25569111//22608085
chr4:57710090-57710091(+) m6A 3'UTR//CDS       25412662//24981863//25569111//22608085
chr4:57710131-57710132(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085
chr4:57710247-57710248(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710279-57710280(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710290-57710291(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710362-57710363(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710402-57710403(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710420-57710421(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710476-57710477(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:57710524-57710525(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:57710580-57710581(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710592-57710593(+) m6A 3'UTR       25456834//24981863//25569111//22608085
chr4:57710752-57710753(+) m6A 3'UTR       24981863//25569111
chr4:57710846-57710847(+) m6A 3'UTR       24981863
chr4:57710874-57710875(+) m6A 3'UTR       24981863
chr4:57710905-57710906(+) m6A 3'UTR       24981863
chr4:57710960-57710961(+) m6A 3'UTR       24981863
chr4:57710985-57710986(+) m6A 3'UTR       24981863
chr9:112705191-112705192(+) m6A CDS       24284625//24209618//24981863//22608085
chr9:112705197-112705198(+) Am CDS       -
chr9:112705228-112705229(+) m6A CDS       24284625//24209618//24981863//22608085
chr9:112705266-112705267(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr9:112705319-112705320(+) m6A CDS       24284625//24209618//24981863//22608085
chr9:112705334-112705335(+) m6A CDS       24284625//24209618//24981863//22608085
chr9:112705382-112705383(+) m6A CDS       24284625//24209618//24981863
chr9:112705471-112705472(+) m6A CDS       24284625//24209618
chr9:112705531-112705532(+) m6A CDS       24284625//24209618
chr9:112705598-112705599(+) m6A CDS       24284625//24209618
chr9:112705761-112705762(+) m6A 3'UTR       24284625
chr9:112705793-112705794(+) m6A 3'UTR       24284625
chr9:112705804-112705805(+) m6A 3'UTR       24284625
chr9:112705874-112705875(+) m6A 3'UTR       24284625
chr9:112705909-112705910(+) m6A 3'UTR       24284625
chr9:112705926-112705927(+) m6A 3'UTR       24284625

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Palm2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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