Basic Information:

  VIRBase ID:  

VHID00599281

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Pptc7:  NM_177242     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Pptc7
miRBase Accession/Entrez ID	MIMAT0005540	320717
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9130017A15Rik//AA672638//AI848390//TA-PP2C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pptc7	chr5:122284383-122284384(+) m6A 5'UTR       25412662//24981863//25569111 chr5:122284433-122284434(+) m6A 5'UTR       25412662//24981863//25569111 chr5:122284731-122284732(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:122284822-122284823(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:122295835-122295836(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111 chr5:122308160-122308161(+) m6A 5'UTR//CDS       25683224//25456834//24981863//25569111 chr5:122308172-122308173(+) m6A 5'UTR//CDS       25456834//24981863//25569111 chr5:122308192-122308193(+) m6A 5'UTR//CDS       25456834//24981863//25569111 chr5:122308204-122308205(+) m6A CDS       24981863//25569111 chr5:122313654-122313655(+) m6A CDS       25569111//22608085 chr5:122317227-122317228(+) m6A CDS       25683224 chr5:122319740-122319741(+) m6A CDS       25683224 chr5:122320869-122320870(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:122320951-122320952(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:122321012-122321013(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:122321035-122321036(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:122321184-122321185(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:122321231-122321232(+) Y 3'UTR//exon       26075521 chr5:122321256-122321257(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:122321312-122321313(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:122321559-122321560(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:122321572-122321573(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:122321619-122321620(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:122321738-122321739(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr5:122321983-122321984(+) m6A 3'UTR       25456834//24981863//25569111 chr5:122322634-122322635(+) m6A 3'UTR       24981863//22608085 chr5:122322673-122322674(+) m6A 3'UTR       24981863//22608085 chr5:122322680-122322681(+) m6A 3'UTR       24981863//22608085 chr5:122322957-122322958(+) m6A 3'UTR       24981863//22608085 chr5:122322964-122322965(+) m6A 3'UTR       24981863//22608085 chr5:122323017-122323018(+) m6A 3'UTR       24981863//22608085 chr5:122323536-122323537(+) m6A 3'UTR       25456834//24981863 chr5:122323555-122323556(+) m6A 3'UTR       25456834//24981863 chr5:122323650-122323651(+) m6A 3'UTR       25683224//25456834 chr5:122323739-122323740(+) m6A 3'UTR       25683224//25456834//24981863 chr5:122324027-122324028(+) m6A 3'UTR       25456834//24981863 chr5:122324057-122324058(+) m6A 3'UTR       25456834//24981863//25569111 chr5:122324151-122324152(+) m6A 3'UTR       25456834//24981863//25569111 chr5:122324244-122324245(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pptc7	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Pptc7

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar