Basic Information:

  VIRBase ID:  

VHID00599230

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Hif1an:  NM_176958     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Hif1an
miRBase Accession/Entrez ID	MIMAT0005540	319594
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2310046M24Rik//A830014H24Rik//FI//FIH//FIH1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hif1an	chr19:44563314-44563315(+) m6A CDS//exon       25569111//22608085 chr19:44563341-44563342(+) m6A CDS//exon       25569111//22608085 chr19:44563449-44563450(+) m6A CDS//exon       24981863//25569111 chr19:44563504-44563505(+) m6A CDS//exon       25412662//24981863//25569111 chr19:44563561-44563562(+) m6A exon//intron       25412662//24981863//25569111 chr19:44565893-44565894(+) m6A CDS       25683224//25456834 chr19:44565930-44565931(+) m6A CDS       25683224//25456834//25569111 chr19:44565951-44565952(+) m6A CDS       25683224//25456834//25569111 chr19:44565964-44565965(+) m6A CDS       25683224//25456834//25569111 chr19:44571129-44571130(+) m6A CDS       25569111 chr19:44571223-44571224(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr19:44571228-44571229(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr19:44571266-44571267(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr19:44571271-44571272(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr19:44571373-44571374(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr19:44573969-44573970(+) m6A 3'UTR       22608085 chr19:44574023-44574024(+) m6A 3'UTR       22608085 chr19:44574324-44574325(+) m6A 3'UTR       22608085 chr19:44574532-44574533(+) Y 3'UTR//exon       26075521 chr19:44574669-44574670(+) m6A 3'UTR       22608085 chr19:44575421-44575422(+) m6A 3'UTR       25412662//22608085 chr19:44575477-44575478(+) m6A 3'UTR       25412662 chr19:44575491-44575492(+) m6A 3'UTR       25412662 chr19:44575539-44575540(+) m6A 3'UTR       25412662 chr19:44575553-44575554(+) m6A 3'UTR       25412662 chr19:44575570-44575571(+) m6A 3'UTR       25412662 chr19:44575582-44575583(+) m6A 3'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Hif1an

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar