Basic Information:

  VIRBase ID:  

VHID00599225

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Cxxc4:  NM_001004367     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Cxxc4
miRBase Accession/Entrez ID	MIMAT0005540	319478
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9330210J02Rik//C030003J12Rik//Id//Idax

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cxxc4	chr3:134236511-134236512(+) m6A 5'UTR//exon       25412662//24981863//22608085 chr3:134236541-134236542(+) m6A 5'UTR//exon       25412662//24981863//22608085 chr3:134236839-134236840(+) m6A 5'UTR//exon       24981863 chr3:134239461-134239462(+) m6A 5'UTR//intron       25683224//25412662//24981863//22608085 chr3:134239479-134239480(+) m6A 5'UTR//intron       25683224//25412662//24981863//22608085 chr3:134239609-134239610(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr3:134239663-134239664(+) m6A 5'UTR//CDS//intron       25683224//25412662//24981863//25569111 chr3:134239747-134239748(+) m6A 5'UTR//CDS//intron       25683224//25412662//24981863//25569111 chr3:134239812-134239813(+) m6A 5'UTR//CDS//intron       25412662//24981863//25569111 chr3:134239927-134239928(+) m6A CDS//intron       25412662//24981863 chr3:134240157-134240158(+) m6A 5'UTR//CDS//intron       25456834//25412662//24981863//25569111//22608085 chr3:134240267-134240268(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:134240276-134240277(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:134240299-134240300(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:134240358-134240359(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:134240461-134240462(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085 chr3:134240491-134240492(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085 chr3:134240638-134240639(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr3:134240651-134240652(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr3:134240696-134240697(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr3:134240847-134240848(+) m6A exon//intron       25683224//24981863//22608085 chr3:134240915-134240916(+) m6A exon//intron       25683224//24981863//22608085 chr3:134241033-134241034(+) m6A exon//intron       24981863 chr3:134241050-134241051(+) m6A exon//intron       24981863 chr3:134241058-134241059(+) m6A exon//intron       24981863 chr3:134241084-134241085(+) m6A exon//intron       24981863 chr3:134241117-134241118(+) m6A exon//intron       24981863 chr3:134241136-134241137(+) m6A exon//intron       24981863 chr3:134241157-134241158(+) m6A exon//intron       24981863 chr3:134241886-134241887(+) m6A exon//intron       24981863 chr3:134241924-134241925(+) m6A exon//intron       24981863 chr3:134242000-134242001(+) m6A exon//intron       24981863 chr3:134242036-134242037(+) m6A exon//intron       24981863//22608085 chr3:134242056-134242057(+) m6A exon//intron       24981863//22608085 chr3:134242133-134242134(+) m6A exon//intron       24981863//22608085 chr3:134242163-134242164(+) m6A exon//intron       24981863//22608085 chr3:134242209-134242210(+) m6A exon//intron       24981863//22608085 chr3:134242226-134242227(+) m6A exon//intron       24981863//22608085 chr3:134258055-134258056(+) m6A CDS//exon       24981863 chr3:134258143-134258144(+) m6A 3'UTR//exon       24981863 chr3:134258164-134258165(+) m6A 3'UTR//exon       24981863//26404942 chr3:134258246-134258247(+) m6A 3'UTR//exon       24981863//22608085 chr3:134258253-134258254(+) m6A 3'UTR//exon       24981863//22608085 chr3:134258269-134258270(+) m6A 3'UTR//exon       24981863//22608085 chr3:134258295-134258296(+) m6A 3'UTR//exon       24981863//22608085 chr3:134260311-134260312(+) m6A 3'UTR       24981863 chr3:134260396-134260397(+) m6A 3'UTR       24981863//26404942 chr3:134260412-134260413(+) m6A 3'UTR       24981863//26404942 chr3:134260435-134260436(+) m6A 3'UTR       24981863//26404942 chr3:134260464-134260465(+) m6A 3'UTR       24981863//26404942 chr3:134260539-134260540(+) m6A 3'UTR       24981863 chr3:134261217-134261218(+) m6A 3'UTR       24981863 chr3:134261238-134261239(+) m6A 3'UTR       24981863 chr3:134261259-134261260(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Cxxc4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar