Basic Information:

  VIRBase ID:  

VHID00599222

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          C5ar2:  NM_001146005     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	C5ar2
miRBase Accession/Entrez ID	MIMAT0005540	319430
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C5L//C5L2//E030029A11Rik//Gpr//Gpr77

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C5ar2	chr7:16821786(-) A-I      3'UTR chr7:16821787(-) A-I      3'UTR chr7:16821520(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C5ar2	chr7:16236487-16236488(-) m6A 3'UTR       24981863 chr7:16236512-16236513(-) m6A 3'UTR       24981863 chr7:16236610-16236611(-) m6A 3'UTR       24981863 chr7:16236616-16236617(-) m6A 3'UTR       24981863 chr7:16236640-16236641(-) m6A 3'UTR       24981863 chr7:16236662-16236663(-) m6A 3'UTR       24981863 chr7:16236691-16236692(-) m6A 3'UTR       24981863 chr7:16236709-16236710(-) m6A 3'UTR       24981863 chr7:16236797-16236798(-) m6A 3'UTR       24981863 chr7:16237374-16237375(-) m6A CDS       24981863//22575960 chr7:16237498-16237499(-) m6A CDS       24981863//22575960 chr7:16237548-16237549(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C5ar2	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: C5ar2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar