Detail Information

Basic Information:


  VIRBase ID:  

VHID00599203

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Prex1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Prex1
miRBase
Accession/Entrez ID		 MIMAT0005540 277360
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - G630042G04//P-RE//P-REX1//Setd6

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Prex1
chr2:166566651-166566652(-) m6A 3'UTR       25683224
chr2:166566682-166566683(-) m6A 3'UTR       25683224
chr2:166566723-166566724(-) m6A 3'UTR       25683224
chr2:166566738-166566739(-) m6A 3'UTR       25683224//24981863
chr2:166566751-166566752(-) m6A 3'UTR       25683224//24981863
chr2:166566827-166566828(-) m6A 3'UTR       25683224//24981863
chr2:166566849-166566850(-) m6A 3'UTR       25683224//24981863
chr2:166567032-166567033(-) m6A 3'UTR       24981863
chr2:166567273-166567274(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567295-166567296(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567320-166567321(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567362-166567363(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567398-166567399(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567431-166567432(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:166567465-166567466(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:166567638-166567639(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:166567667-166567668(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:166567701-166567702(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:166567752-166567753(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr2:166567806-166567807(-) m6A 3'UTR       25683224//24981863
chr2:166567814-166567815(-) m6A CDS       25683224//24981863
chr2:166569361-166569362(-) m6A CDS//exon       25683224//22608085
chr2:166569423-166569424(-) m6A CDS//exon       25683224//22608085
chr2:166570458-166570459(-) m6A CDS//exon       25683224//22608085
chr2:166573016-166573017(-) m6A CDS       24981863//22608085
chr2:166574167-166574168(-) m6A CDS       25683224//22608085
chr2:166574194-166574195(-) m6A CDS       25683224//22608085
chr2:166574207-166574208(-) m6A CDS       25683224//22608085
chr2:166576695-166576696(-) m6A CDS       25683224//22608085
chr2:166577900-166577901(-) m6A CDS       25683224//22608085
chr2:166577910-166577911(-) m6A CDS       25683224//22608085
chr2:166577930-166577931(-) m6A CDS       25683224//22608085
chr2:166577939-166577940(-) m6A CDS       25683224//22608085
chr2:166577966-166577967(-) m6A CDS       25683224//22608085
chr2:166577998-166577999(-) m6A CDS       25683224//22608085
chr2:166580249-166580250(-) m6A CDS       25683224//22608085
chr2:166580431-166580432(-) m6A CDS       25683224//22608085
chr2:166580453-166580454(-) m6A CDS       25683224//22608085
chr2:166581974-166581975(-) m6A 5'UTR//CDS       25683224//22608085
chr2:166583148-166583149(-) m6A CDS       25683224//22608085
chr2:166583206-166583207(-) m6A CDS       25683224//22608085
chr2:166583211-166583212(-) m6A CDS       25683224//22608085
chr2:166583251-166583252(-) m6A CDS       25683224//22608085
chr2:166585121-166585122(-) m6A CDS       25683224//22608085
chr2:166585129-166585130(-) m6A CDS       25683224//22608085
chr2:166585154-166585155(-) m6A CDS       25683224//22608085
chr2:166585220-166585221(-) m6A CDS       25683224//22608085
chr2:166585298-166585299(-) m6A CDS       25683224//22608085
chr2:166585736-166585737(-) m6A CDS       25683224//22608085
chr2:166585763-166585764(-) m6A CDS       25683224//22608085
chr2:166586640-166586641(-) m6A CDS       25683224//22608085
chr2:166587161-166587162(-) m6A CDS       25683224//22608085
chr2:166587188-166587189(-) m6A CDS       25683224//22608085
chr2:166588982-166588983(-) m6A CDS       25683224//22608085
chr2:166590466-166590467(-) m6A CDS       25683224//22608085
chr2:166592302-166592303(-) m6A CDS       25683224//22608085
chr2:166592841-166592842(-) m6A CDS       25683224//22608085
chr2:166593781-166593782(-) m6A CDS       25683224//22608085
chr2:166593817-166593818(-) m6A CDS       25683224//22608085
chr2:166593830-166593831(-) m6A CDS       25683224//22608085
chr2:166596345-166596346(-) m6A CDS       25683224//22608085
chr2:166596353-166596354(-) m6A CDS       25683224//22608085
chr2:166599621-166599622(-) m6A CDS       25683224//22608085
chr2:166599658-166599659(-) m6A CDS       25683224//22608085
chr2:166599678-166599679(-) m6A CDS//exon       25683224//22608085
chr2:166601567-166601568(-) m6A CDS//exon       25683224//22608085
chr2:166611673-166611674(-) m6A CDS       25683224//24981863//22608085
chr2:166611713-166611714(-) m6A CDS       25683224//24981863//22608085
chr2:166613144-166613145(-) m6A CDS       25683224//22608085
chr2:166613228-166613229(-) m6A CDS       25683224//22608085
chr2:166617949-166617950(-) m6A CDS       25683224//22608085
chr2:166621236-166621237(-) m6A CDS       25683224//22608085
chr2:166621260-166621261(-) m6A CDS       25683224//22608085
chr2:166621317-166621318(-) m6A CDS       25683224//22608085
chr2:166633439-166633440(-) m6A CDS//exon       25683224//22608085
chr2:166646966-166646967(-) m6A exon//intron       25683224//22608085
chr2:166703532-166703533(-) m6A exon//intron       25683224//22608085
chr2:166703569-166703570(-) m6A exon//intron       25683224//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Prex1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

Starting a new search, please wait ...