Detail Information

Basic Information:


  VIRBase ID:  

VHID00599097

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Vwa1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Vwa1
miRBase
Accession/Entrez ID
MIMAT0005540 246228
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4932416A11Rik//W//WARP

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Vwa1
chr4:155769695-155769696(-) m6A 3'UTR       25683224//22608085
chr4:155769906-155769907(-) m6A 3'UTR       25683224//24981863
chr4:155769936-155769937(-) m6A 3'UTR       25683224//24981863
chr4:155770006-155770007(-) m6A 3'UTR       25683224//24981863//22608085
chr4:155770013-155770014(-) m6A 3'UTR       25683224//24981863//22608085
chr4:155770020-155770021(-) m6A 3'UTR       25683224//24981863//22608085
chr4:155770044-155770045(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr4:155770138-155770139(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr4:155770272-155770273(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr4:155770326-155770327(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr4:155770342-155770343(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr4:155770377-155770378(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr4:155770499-155770500(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:155770549-155770550(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:155770580-155770581(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:155770821-155770822(-) m6A CDS       25683224
chr4:155770827-155770828(-) m6A CDS       25683224
chr4:155770843-155770844(-) m6A CDS       25683224
chr4:155770849-155770850(-) m6A CDS       25683224
chr4:155772973-155772974(-) m6A CDS       24981863
chr4:155774489-155774490(-) m6A CDS       25683224//25569111
chr4:155774694-155774695(-) m6A 5'UTR       25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Vwa1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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