Basic Information:

  VIRBase ID:  

VHID00599022

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Rgp1:  NM_172866     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Rgp1
miRBase Accession/Entrez ID	MIMAT0005540	242406
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110029E03Rik//AI527196//F730001J03//mKIAA0258

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rgp1	chr4:43578846-43578847(+) m6A 5'UTR       25412662//24981863//25569111 chr4:43578853-43578854(+) m6A 5'UTR       25412662//24981863//25569111 chr4:43578895-43578896(+) m6A 5'UTR       25412662//25569111 chr4:43578958-43578959(+) m6A 5'UTR//exon       25683224//25412662//25569111 chr4:43581618-43581619(+) m6A CDS//exon       24981863 chr4:43582905-43582906(+) m6A CDS       25683224//25569111 chr4:43582957-43582958(+) m6A CDS       25683224//24981863//25569111 chr4:43582968-43582969(+) m6A CDS       25683224//24981863//25569111 chr4:43582982-43582983(+) m6A CDS//intron       25683224//24981863//25569111 chr4:43582997-43582998(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr4:43583084-43583085(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:43583126-43583127(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr4:43583146-43583147(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr4:43583184-43583185(+) Y 3'UTR//exon//intron       26075521 chr4:43583500-43583501(+) m6A 3'UTR//intron       24981863//25569111 chr4:43583520-43583521(+) m6A 3'UTR//intron       24981863//25569111 chr4:43583625-43583626(+) m6A 3'UTR//intron       24981863//25569111 chr4:43584464-43584465(+) m6A 3'UTR//intron       25412662//22608085 chr4:43584493-43584494(+) m6A 3'UTR//intron       25412662 chr4:43584583-43584584(+) m6A 3'UTR//intron       25412662 chr4:43584724-43584725(+) m6A 3'UTR//intron       25412662 chr4:43584773-43584774(+) m6A 3'UTR//intron       25412662 chr4:43584841-43584842(+) m6A 3'UTR//intron       25412662//22608085 chr4:43586502-43586503(+) m6A 3'UTR//intron       25683224//22608085 chr4:43586602-43586603(+) m6A 3'UTR//intron       25683224//25412662//22608085 chr4:43586644-43586645(+) m6A 3'UTR//intron       25683224//25412662//22608085 chr4:43586653-43586654(+) m6A 3'UTR//intron       25683224//25412662 chr4:43586731-43586732(+) m6A 3'UTR//intron       25683224//25412662//24981863 chr4:43586767-43586768(+) m6A 3'UTR//intron       25683224//25412662//24981863 chr4:43586805-43586806(+) m6A 3'UTR//intron       25683224//25412662//24981863//22608085 chr4:43586834-43586835(+) m6A 3'UTR//intron       25683224//25412662//24981863//22608085 chr4:43586907-43586908(+) m6A 3'UTR//intron       25683224//25412662//24981863//22608085 chr4:43586939-43586940(+) m6A 3'UTR//intron       25683224//25412662//22608085 chr4:43587062-43587063(+) Y 3'UTR//exon//intron       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Rgp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar