Basic Information:

  VIRBase ID:  

VHID00598941

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Col23a1:  NM_153393     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Col23a1
miRBase Accession/Entrez ID	MIMAT0005540	237759
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810458L13Rik//AI429655

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Col23a1	chr11:51289986-51289987(+) m6A 5'UTR       25412662 chr11:51290169-51290170(+) m6A CDS       25412662 chr11:51316922-51316923(+) m6A CDS       25412662 chr11:51549694-51549695(+) m6A CDS       25412662 chr11:51551135-51551136(+) m6A CDS       25412662 chr11:51551988-51551989(+) m6A CDS       25412662 chr11:51557499-51557500(+) m6A CDS       25412662 chr11:51557517-51557518(+) m6A CDS       25412662 chr11:51558448-51558449(+) m6A CDS       25412662 chr11:51560017-51560018(+) m6A CDS       25412662 chr11:51560026-51560027(+) m6A CDS       25412662 chr11:51561893-51561894(+) m6A CDS       25412662 chr11:51563028-51563029(+) m6A CDS       25412662 chr11:51563037-51563038(+) m6A CDS       25412662 chr11:51564796-51564797(+) m6A CDS       25412662 chr11:51567918-51567919(+) m6A CDS       25412662 chr11:51569471-51569472(+) m6A CDS       25412662 chr11:51570106-51570107(+) m6A CDS       25412662 chr11:51571184-51571185(+) m6A CDS       25683224//25412662 chr11:51571195-51571196(+) m6A CDS       25683224//25412662 chr11:51571211-51571212(+) m6A CDS       25683224//25412662 chr11:51571233-51571234(+) m6A CDS       25683224//25412662 chr11:51572472-51572473(+) m6A CDS       25683224//25412662 chr11:51574148-51574149(+) m6A CDS       25412662 chr11:51574185-51574186(+) m6A CDS       25683224//25412662 chr11:51574436-51574437(+) m6A CDS       25683224//25412662//24981863 chr11:51574445-51574446(+) m6A CDS       25683224//25412662//24981863 chr11:51574451-51574452(+) m6A CDS       25412662//24981863 chr11:51576861-51576862(+) m6A CDS       25412662//24981863 chr11:51580073-51580074(+) m6A 3'UTR       25456834//24981863//25569111 chr11:51580114-51580115(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:51580126-51580127(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:51580131-51580132(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:51580146-51580147(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:51580211-51580212(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580243-51580244(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:51580261-51580262(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:51580345-51580346(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580386-51580387(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580409-51580410(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580453-51580454(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580480-51580481(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580574-51580575(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580651-51580652(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580661-51580662(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580715-51580716(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580737-51580738(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580793-51580794(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580803-51580804(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580823-51580824(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580841-51580842(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580867-51580868(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580889-51580890(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580915-51580916(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580924-51580925(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:51580959-51580960(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:51580974-51580975(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:51581008-51581009(+) m6A 3'UTR       25456834//24981863//22608085 chr11:51581356-51581357(+) m6A 3'UTR       24981863 chr11:51581515-51581516(+) m6A 3'UTR       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Col23a1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar