Basic Information:

  VIRBase ID:  

VHID00598868

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Samd4b:  NM_175021     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Samd4b
miRBase Accession/Entrez ID	MIMAT0005540	233033
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	BC042901

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Samd4b	chr7:28399682-28399683(-) Y 3'UTR//exon       26075521 chr7:28399716-28399717(-) m6A 3'UTR       25412662 chr7:28400129-28400130(-) m6A 3'UTR       25456834 chr7:28400189-28400190(-) m6A 3'UTR       24981863//25456834 chr7:28400216-28400217(-) m6A 3'UTR       24981863//25456834 chr7:28400288-28400289(-) m6A 3'UTR       25683224//24981863 chr7:28400293-28400294(-) m6A 3'UTR       25683224//24981863 chr7:28401089-28401090(-) m6A 3'UTR       24981863 chr7:28401172-28401173(-) m6A 3'UTR       24981863//25569111 chr7:28401203-28401204(-) m6A 3'UTR       25412662//24981863//25569111 chr7:28401240-28401241(-) m6A 3'UTR       25412662//24981863//25456834//25569111 chr7:28401252-28401253(-) m6A 3'UTR       25412662//24981863//25456834//25569111 chr7:28401285-28401286(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr7:28401346-28401347(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:28401355-28401356(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:28401380-28401381(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:28405515-28405516(-) m6A 3'UTR//CDS       25412662//22608085 chr7:28405540-28405541(-) m6A 3'UTR//CDS       25412662//22608085 chr7:28405550-28405551(-) m6A 3'UTR//CDS       25412662//22608085 chr7:28405594-28405595(-) m6A 3'UTR//CDS       25412662//22608085 chr7:28406403-28406404(-) m6A 3'UTR//CDS       25683224//25412662//24981863//22608085 chr7:28406475-28406476(-) m6A 3'UTR//CDS       25683224//25412662//24981863//22608085 chr7:28406493-28406494(-) m6A 3'UTR//CDS       25683224//25412662//24981863//22608085 chr7:28406514-28406515(-) m6A 3'UTR//CDS       25683224//25412662//24981863 chr7:28406645-28406646(-) m6A 3'UTR//CDS       25412662//22608085 chr7:28407257-28407258(-) m6A 3'UTR//CDS       25412662//24981863//22608085 chr7:28407967-28407968(-) m6A 3'UTR//CDS//intron       25412662//22608085 chr7:28413876-28413877(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr7:28413941-28413942(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr7:28413963-28413964(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr7:28414007-28414008(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:28414122-28414123(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:28414229-28414230(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr7:28423479-28423480(-) m6A CDS       25412662//24981863//25569111 chr7:28423568-28423569(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr7:28423617-28423618(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:28423693-28423694(-) m6A 5'UTR       25412662//24981863//25569111 chr7:28423746-28423747(-) m6A 5'UTR       25412662//24981863//25569111 chr7:28423808-28423809(-) m6A 5'UTR       25412662//24981863//25569111 chr7:28423814-28423815(-) m6A 5'UTR       25412662//24981863//25569111 chr7:28546853-28546854(-) m6A intron       25683224 chr7:28546988-28546989(-) m6A intron       25683224//24981863 chr7:28546998-28546999(-) m6A intron       25683224//25456834//24981863 chr7:28547037-28547038(-) m6A intron       25683224//25456834//24981863 chr7:28547043-28547044(-) m6A intron       25683224//25456834//24981863 chr7:28547050-28547051(-) m6A intron       25456834//24981863 chr7:28547068-28547069(-) m6A intron       25456834//24981863 chr7:28547088-28547089(-) m6A intron       25456834//24981863 chr7:28558912-28558913(-) m6A intron       25683224 chr7:28558950-28558951(-) m6A intron       25683224 chr7:28559025-28559026(-) m6A intron       25683224//24981863 chr7:28559077-28559078(-) m6A intron       25683224//24981863//25569111 chr7:28559356-28559357(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28559437-28559438(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:28559465-28559466(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:28559505-28559506(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:28559517-28559518(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:28559560-28559561(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:28559630-28559631(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28559657-28559658(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28559758-28559759(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28560154-28560155(-) m6A intron       25683224//25412662//24981863//25569111 chr7:28560178-28560179(-) m6A intron       25683224//25412662//25569111 chr7:28563009-28563010(-) m6A intron       25569111 chr7:28563064-28563065(-) m6A intron       25569111 chr7:28564338-28564339(-) m6A intron       25569111 chr7:28564356-28564357(-) m6A intron       25569111 chr7:28564365-28564366(-) m6A intron       25569111 chr7:28564834-28564835(-) m6A intron       25683224//25412662//24981863//25456834//25569111 chr7:28564881-28564882(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28564886-28564887(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28564968-28564969(-) m6A intron       25683224//25456834//25412662//24981863//25569111 chr7:28565203-28565204(-) m6A intron       25683224//25412662//24981863//25569111 chr7:28568090-28568091(-) m6A intron       25683224//25412662//24981863 chr7:28568239-28568240(-) m6A intron       25683224//24981863//25569111 chr7:28568260-28568261(-) m6A intron       25683224//24981863//25569111 chr7:28568285-28568286(-) m6A intron       25683224//24981863//25569111 chr7:28569782-28569783(-) m6A intron       25683224//25412662//24981863//25569111 chr7:28569796-28569797(-) m6A intron       25683224//25412662//24981863//25569111 chr7:28570250-28570251(-) m6A intron       25683224//25412662//24981863//25569111 chr7:28598108-28598109(-) m6A 5'UTR       25412662//24981863//25456834//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Samd4b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar