Basic Information:

  VIRBase ID:  

VHID00598837

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Adap1:  NM_172723     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Adap1
miRBase Accession/Entrez ID	MIMAT0005540	231821
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4930431P11Rik//Cent//Centa1//GC1L//p42IP4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Adap1	chr5:139272025-139272026(-) m6A 3'UTR//exon       24981863//22608085 chr5:139272367-139272368(-) m6A 3'UTR//exon       25683224//24981863 chr5:139272394-139272395(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272447-139272448(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272615-139272616(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272660-139272661(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr5:139272670-139272671(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr5:139272680-139272681(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr5:139272702-139272703(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr5:139272707-139272708(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr5:139272749-139272750(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272862-139272863(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272884-139272885(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:139272897-139272898(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr5:139272988-139272989(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr5:139273001-139273002(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr5:139273053-139273054(-) m6A CDS//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr5:139273363-139273364(-) m6A CDS//exon       25683224//24981863//22608085 chr5:139273402-139273403(-) m6A CDS//exon       25683224//22608085 chr5:139273741-139273742(-) m6A CDS//exon       22608085 chr5:139273802-139273803(-) m6A CDS//exon       22608085 chr5:139274457-139274458(-) m6A CDS//exon       22608085 chr5:139274801-139274802(-) m6A CDS//exon       25683224//22608085 chr5:139279551-139279552(-) m6A CDS//exon       25683224//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Adap1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Adap1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar