Basic Information:

  VIRBase ID:  

VHID00598806

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Ttc39a:  NM_153392     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Ttc39a
miRBase Accession/Entrez ID	MIMAT0005540	230603
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4922503N01Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ttc39a	chr4:109426307-109426308(+) m6A CDS       25412662 chr4:109426346-109426347(+) m6A CDS       25412662 chr4:109426357-109426358(+) m6A CDS       25412662 chr4:109428133-109428134(+) m6A CDS       25412662 chr4:109428184-109428185(+) m6A CDS       25412662 chr4:109444362-109444363(+) m6A 3'UTR       24981863 chr4:109444443-109444444(+) m6A 3'UTR       24981863 chr4:109444498-109444499(+) m6A 3'UTR       24981863 chr4:109444503-109444504(+) m6A 3'UTR       24981863 chr4:109444508-109444509(+) m6A 3'UTR       24981863 chr4:109444530-109444531(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ttc39a	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Ttc39a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar