Detail Information

Basic Information:


  VIRBase ID:  

VHID00598766

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Gmeb2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Gmeb2
miRBase
Accession/Entrez ID		 MIMAT0005540 229004
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AI839884

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Gmeb2
chr2:180999073(-) A-I      intronic
chr2:180997578(-) A-I      intronic
chr2:180997587(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Gmeb2
chr2:181262873(-) A-I intron -    16940548
chr2:181262882(-) A-I intron -    16940548
chr2:181264368(-) A-I intron -    16940548

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Gmeb2
chr2:181253153-181253154(-) m6A 3'UTR       -
chr2:181253201-181253202(-) m6A 3'UTR       -
chr2:181253213-181253214(-) m6A 3'UTR       -
chr2:181253236-181253237(-) m6A 3'UTR       -
chr2:181253364-181253365(-) m6A 3'UTR       25569111
chr2:181253486-181253487(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr2:181253569-181253570(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr2:181253657-181253658(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr2:181253704-181253705(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:181253798-181253799(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:181253845-181253846(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:181253923-181253924(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:181254026-181254027(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:181254274-181254275(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111
chr2:181254400-181254401(-) m6A 3'UTR//CDS       25683224//25569111
chr2:181254808-181254809(-) m6A exon//intron       25683224
chr2:181254863-181254864(-) m6A exon//intron       25683224
chr2:181255149-181255150(-) m6A 3'UTR//CDS//exon       25412662
chr2:181255163-181255164(-) m6A 3'UTR//CDS//exon       25412662
chr2:181255233-181255234(-) m6A 3'UTR//CDS//exon       25412662//25569111
chr2:181255514-181255515(-) m6A 3'UTR//CDS//exon       25412662//25569111
chr2:181255545-181255546(-) m6A 3'UTR//CDS//exon       25569111//22608085
chr2:181260389-181260390(-) m6A 3'UTR//CDS       -
chr2:181265044-181265045(-) m6A 3'UTR//CDS       22608085
chr2:181265083-181265084(-) m6A 3'UTR//CDS       22608085
chr2:181265623-181265624(-) m6A exon//intron       22608085
chr2:181278020-181278021(-) m6A CDS//exon       -
chr2:181278112-181278113(-) m6A 5'UTR//exon       25412662//24981863//25569111
chr2:181287009-181287010(-) m6A 5'UTR//intron       25412662//24981863//25569111
chr2:181287067-181287068(-) m6A 5'UTR//intron       25412662//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Gmeb2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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