Detail Information

Basic Information:


  VIRBase ID:  

VHID00598658

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Tmem44:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Tmem44
miRBase
Accession/Entrez ID		 MIMAT0005540 224090
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 1700007N03Rik//9330161C17Rik//B230220N21

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Tmem44
chr16:30511996(-) A-I      3'UTR
chr16:30512041(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tmem44
chr16:30513122-30513123(-) m6A 3'UTR//exon       25569111
chr16:30513236-30513237(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513243-30513244(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513252-30513253(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513260-30513261(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513286-30513287(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513293-30513294(-) m6A 3'UTR//exon       24981863//25569111
chr16:30513362-30513363(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr16:30513399-30513400(-) m6A 3'UTR//exon       25683224//24981863//25412662//25569111//22608085
chr16:30513509-30513510(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22608085
chr16:30513561-30513562(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22608085
chr16:30513576-30513577(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22608085
chr16:30513602-30513603(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111
chr16:30513619-30513620(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111
chr16:30513716-30513717(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30513894-30513895(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30513902-30513903(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30513947-30513948(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30513965-30513966(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514083-30514084(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:30514113-30514114(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:30514204-30514205(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514239-30514240(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514277-30514278(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514297-30514298(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514341-30514342(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr16:30514366-30514367(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr16:30514389-30514390(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr16:30514422-30514423(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr16:30514514-30514515(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr16:30514523-30514524(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr16:30514602-30514603(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514647-30514648(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514683-30514684(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:30514777-30514778(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111
chr16:30514817-30514818(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111
chr16:30517172-30517173(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111
chr16:30529530-30529531(-) m6A 3'UTR//CDS//exon       25412662//22608085
chr16:30537506-30537507(-) m6A 3'UTR//CDS//exon       25683224//25412662//22608085
chr16:30537550-30537551(-) m6A 3'UTR//CDS//exon       25683224//25412662//22608085
chr16:30539392-30539393(-) m6A 3'UTR//CDS//exon       25683224//25412662//22608085
chr16:30539413-30539414(-) m6A 3'UTR//CDS//exon       25683224//25412662//22608085
chr16:30540745-30540746(-) m6A 3'UTR//CDS//exon       25683224//22608085
chr16:30540872-30540873(-) m6A 3'UTR//CDS//exon       25683224//22608085
chr16:30542744-30542745(-) m6A exon//intron       25412662
chr16:30542801-30542802(-) m6A exon//intron       25412662
chr16:30549526-30549527(-) m6A exon//intron       25683224//24981863
chr16:30549539-30549540(-) m6A exon//intron       25683224//24981863
chr16:30549583-30549584(-) m6A exon//intron       25683224//24981863
chr16:30549911-30549912(-) m6A exon//intron       24981863//25569111
chr16:30549950-30549951(-) m6A exon//intron       24981863//25569111
chr16:30549970-30549971(-) m6A exon//intron       24981863//25569111
chr16:30550105-30550106(-) m6A exon//intron       25683224//24981863//25569111
chr16:30550179-30550180(-) m6A exon//intron       25683224//24981863//25569111
chr16:30550201-30550202(-) m6A exon//intron       24981863//25569111
chr16:30550347-30550348(-) m6A exon//intron       25683224//24981863//25569111
chr16:30550455-30550456(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr16:30550461-30550462(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr16:30550533-30550534(-) m6A 5'UTR//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Tmem44

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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