Basic Information:

  VIRBase ID:  

VHID00598630

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Chdh:  NM_172264     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Chdh
miRBase Accession/Entrez ID	MIMAT0005540	218865
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AU041472//D630034H06Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Chdh	chr14:30031325-30031326(+) m6A CDS       22575960 chr14:30031359-30031360(+) m6A CDS       22575960 chr14:30031367-30031368(+) m6A CDS       22575960 chr14:30031487-30031488(+) m6A CDS       25456834//22575960 chr14:30031566-30031567(+) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr14:30031577-30031578(+) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr14:30031616-30031617(+) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr14:30031656-30031657(+) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr14:30031720-30031721(+) m6A CDS       24981863//25569111//22575960 chr14:30032817-30032818(+) m6A CDS       24981863 chr14:30036588-30036589(+) m6A CDS       22575960 chr14:30036624-30036625(+) m6A CDS       22575960 chr14:30036698-30036699(+) m6A CDS       22575960 chr14:30036720-30036721(+) m6A CDS       22575960 chr14:30036823-30036824(+) m6A CDS       25456834//24981863//26404942//22608085//22575960 chr14:30036840-30036841(+) m6A CDS       25456834//24981863//26404942//22608085//22575960 chr14:30036869-30036870(+) m6A CDS       25456834//24981863//25569111//26404942//22608085//22575960 chr14:30036876-30036877(+) m6A CDS       25456834//24981863//25569111//26404942//22608085//22575960 chr14:30036891-30036892(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr14:30036923-30036924(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr14:30036978-30036979(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr14:30036990-30036991(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr14:30036999-30037000(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr14:30037026-30037027(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr14:30037221-30037222(+) m6A 3'UTR       22575960 chr14:30037284-30037285(+) m6A 3'UTR       24981863//22608085//22575960 chr14:30037289-30037290(+) m6A 3'UTR       24981863//22608085//22575960 chr14:30037382-30037383(+) m6A 3'UTR       25456834//22575960 chr14:30037518-30037519(+) m6A 3'UTR       22575960 chr14:30037666-30037667(+) m6A 3'UTR       22608085//22575960 chr14:30037734-30037735(+) m6A 3'UTR       22608085//22575960 chr14:30037770-30037771(+) m6A 3'UTR       22608085//22575960 chr14:30037801-30037802(+) m6A 3'UTR       22575960 chr14:30037811-30037812(+) m6A 3'UTR       22575960 chr14:30037830-30037831(+) m6A 3'UTR       22575960 chr14:30038567-30038568(+) m6A 3'UTR       26404942//22575960 chr14:30038594-30038595(+) m6A 3'UTR       26404942//22575960 chr14:30038616-30038617(+) m6A 3'UTR       26404942//22575960 chr14:30038621-30038622(+) m6A 3'UTR       26404942//22575960 chr14:30038681-30038682(+) m6A 3'UTR       22575960 chr14:30038694-30038695(+) m6A 3'UTR       22575960 chr14:30038770-30038771(+) m6A 3'UTR       22608085//22575960 chr14:30038834-30038835(+) m6A 3'UTR       22608085//22575960 chr14:30038852-30038853(+) m6A 3'UTR       22608085//22575960 chr14:30038931-30038932(+) m6A 3'UTR       26404942//22575960 chr14:30038991-30038992(+) m6A 3'UTR       26404942//22575960 chr14:30039020-30039021(+) m6A 3'UTR       26404942//22575960 chr14:30039083-30039084(+) m6A 3'UTR       26404942//22575960 chr14:30039089-30039090(+) m6A 3'UTR       26404942//22575960 chr14:30039110-30039111(+) m6A 3'UTR       22575960 chr14:30039137-30039138(+) m6A 3'UTR       22575960 chr14:30039919-30039920(+) m6A 3'UTR       26404942 chr14:30039982-30039983(+) m6A 3'UTR       26404942 chr14:30039998-30039999(+) m6A 3'UTR       26404942 chr14:30040012-30040013(+) m6A 3'UTR       26404942 chr14:30040072-30040073(+) m6A 3'UTR       24981863//26404942 chr14:30040228-30040229(+) m6A 3'UTR       24981863//22608085 chr14:30040385-30040386(+) m6A 3'UTR       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Chdh

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar