Basic Information:

  VIRBase ID:  

VHID00598500

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Slc45a3:  NM_145977     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Slc45a3
miRBase Accession/Entrez ID	MIMAT0005540	212980
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2210413P12Rik//AU023994//AU043764//IPC//IPCA-6//Pc//Pcanap6//PRST

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc45a3	chr1:131970644-131970645(+) m6A 5'UTR//intron       25412662 chr1:131976823-131976824(+) m6A 5'UTR       25569111 chr1:131977497-131977498(+) m6A CDS       25456834//25569111//22575960 chr1:131977572-131977573(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr1:131977586-131977587(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr1:131977637-131977638(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:131977697-131977698(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:131977703-131977704(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:131977790-131977791(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr1:131978120-131978121(+) m6A CDS       25456834//25412662//24981863//25569111//22575960 chr1:131978184-131978185(+) m6A CDS       25456834//25412662//25569111//22575960 chr1:131978816-131978817(+) m6A CDS       25412662//25569111//22575960 chr1:131979084-131979085(+) m6A exon//intron       25683224//25412662 chr1:131979109-131979110(+) m6A exon//intron       25683224//25412662 chr1:131981339-131981340(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr1:131981347-131981348(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr1:131981397-131981398(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr1:131981537-131981538(+) m6A CDS//exon       25569111//22575960 chr1:131981552-131981553(+) m6A CDS//exon       25569111//22575960

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Slc45a3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar