Basic Information:

  VIRBase ID:  

VHID00598428

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Zzef1:  NM_001045536     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Zzef1
miRBase Accession/Entrez ID	MIMAT0005540	195018
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	8430405D05Rik//BC051585//C130099L13Rik//C85424//mKIAA0399//NSPA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zzef1	chr11:72796291-72796292(+) m6A 5'UTR//exon       25412662//25569111 chr11:72796451-72796452(+) m6A CDS//exon       25412662 chr11:72817963-72817964(+) m6A CDS//exon       25683224//25412662//22608085 chr11:72818000-72818001(+) m6A CDS//exon       25412662//22608085 chr11:72833989-72833990(+) m6A intron       25569111 chr11:72834024-72834025(+) m6A intron       25569111 chr11:72834039-72834040(+) m6A intron       25569111 chr11:72834077-72834078(+) m6A intron       25569111 chr11:72834092-72834093(+) m6A intron       25569111 chr11:72865836-72865837(+) m6A CDS       25683224//22608085 chr11:72874966-72874967(+) m6A CDS       24981863//25569111 chr11:72874983-72874984(+) m6A CDS       24981863//25569111 chr11:72874995-72874996(+) m6A CDS       24981863//25569111 chr11:72875031-72875032(+) m6A CDS       24981863//25569111 chr11:72875051-72875052(+) m6A CDS       25569111 chr11:72881334-72881335(+) m6A CDS       25412662//22608085 chr11:72881349-72881350(+) m6A CDS       25412662//22608085 chr11:72884362-72884363(+) m6A CDS       24981863//25412662//22608085 chr11:72884382-72884383(+) m6A CDS       24981863//25412662//22608085 chr11:72889169-72889170(+) m6A CDS       25456834//25569111 chr11:72889229-72889230(+) m6A CDS       25456834//25569111 chr11:72908489-72908490(+) m6A CDS       25412662//24981863//22608085 chr11:72908505-72908506(+) m6A CDS       25412662//24981863//22608085 chr11:72910182-72910183(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:72910190-72910191(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:72910214-72910215(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:72910227-72910228(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:72910232-72910233(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:72910263-72910264(+) m6A CDS       25412662//22608085 chr11:72910277-72910278(+) m6A CDS       25412662//22608085 chr11:72912322-72912323(+) m6A exon//intron       25412662 chr11:72912410-72912411(+) m6A exon//intron       25412662 chr11:72912929-72912930(+) m6A CDS//exon       25412662//24981863//25569111 chr11:72912935-72912936(+) m6A CDS//exon       25412662//24981863//25569111 chr11:72913195-72913196(+) m6A CDS//exon       25412662//24981863//25569111 chr11:72913222-72913223(+) m6A CDS//exon       25412662//24981863//25569111 chr11:72917804-72917805(+) m6A CDS//exon       22608085 chr11:72923155-72923156(+) m6A CDS//exon       24981863//25569111 chr11:72924646-72924647(+) m6A CDS//exon       24981863//25569111 chr11:72924682-72924683(+) m6A CDS//exon       25412662//24981863//25569111 chr11:72924737-72924738(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22575960 chr11:72924770-72924771(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22575960 chr11:72924791-72924792(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:72924969-72924970(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72925010-72925011(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72925115-72925116(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:72925149-72925150(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:72925361-72925362(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr11:72925408-72925409(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr11:72925501-72925502(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr11:72925559-72925560(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr11:72925723-72925724(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:72925899-72925900(+) m6A 3'UTR//exon       24981863//25456834//25569111 chr11:72925922-72925923(+) m6A 3'UTR//exon       24981863//25456834//25569111 chr11:72925936-72925937(+) m6A 3'UTR//exon       24981863//25456834//25569111 chr11:72925942-72925943(+) m6A 3'UTR//exon       24981863//25456834//25569111 chr11:72926030-72926031(+) m6A 3'UTR//exon       25569111 chr11:72926089-72926090(+) m6A 3'UTR//exon       25569111 chr11:72926133-72926134(+) m6A 3'UTR//exon       25683224//25456834 chr11:72926159-72926160(+) m6A 3'UTR//exon       25683224//25456834 chr11:72926184-72926185(+) m6A 3'UTR//exon       25683224//25456834 chr11:72926241-72926242(+) m6A 3'UTR//exon       25683224//25456834//25569111 chr11:72926303-72926304(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr11:72926343-72926344(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr11:72926404-72926405(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72926426-72926427(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72926448-72926449(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72926460-72926461(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:72926522-72926523(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:72926634-72926635(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr11:72926799-72926800(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:72926814-72926815(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:72926819-72926820(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:72926845-72926846(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr11:72926897-72926898(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zzef1	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Zzef1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar