Basic Information:

  VIRBase ID:  

VHID00598295

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Rnf20:  NM_182999     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Rnf20
miRBase Accession/Entrez ID	MIMAT0005540	109331
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4833430L21Rik//AW540162//C79397//mKIAA4116

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rnf20	chr4:49632254-49632255(+) m6A 5'UTR//exon//intron       25412662//25569111 chr4:49642255-49642256(+) m6A exon//intron       25456834//22608085 chr4:49642367-49642368(+) m6A exon//intron       25456834//24981863//25569111 chr4:49642375-49642376(+) m6A exon//intron       24981863 chr4:49645916-49645917(+) m6A CDS//exon       25412662//22608085 chr4:49645934-49645935(+) m6A CDS//exon       25412662//22608085 chr4:49645967-49645968(+) m6A CDS//exon       25412662//22608085 chr4:49648324-49648325(+) m6A CDS//exon       25412662//22608085 chr4:49649380-49649381(+) m6A CDS       25412662//22608085 chr4:49649397-49649398(+) m6A CDS       25412662//22608085 chr4:49649734-49649735(+) m6A CDS       25412662//22608085 chr4:49649842-49649843(+) m6A CDS       25412662//22608085 chr4:49650014-49650015(+) m6A CDS       25683224//25412662 chr4:49650056-49650057(+) m6A CDS       25683224//25412662//24981863 chr4:49650207-49650208(+) m6A CDS       25683224//25456834//25412662//24981863//22608085 chr4:49650213-49650214(+) m6A CDS       25683224//25456834//25412662//24981863//22608085 chr4:49650267-49650268(+) m6A CDS//exon       25683224//25456834//25412662//24981863//22608085 chr4:49650321-49650322(+) m6A CDS//exon       25683224//25456834//25412662//24981863 chr4:49650975-49650976(+) m6A exon//intron       25683224//25456834//25412662//24981863 chr4:49651460-49651461(+) m6A CDS//exon       25412662//24981863 chr4:49651504-49651505(+) m6A CDS//exon       25412662//24981863 chr4:49652535-49652536(+) m6A CDS//exon       25412662//24981863 chr4:49652541-49652542(+) m6A CDS//exon       25412662//24981863 chr4:49652576-49652577(+) m6A CDS//exon       25412662//24981863 chr4:49652692-49652693(+) m6A exon//intron       25412662 chr4:49653102-49653103(+) m6A CDS       25683224//22608085 chr4:49653116-49653117(+) m6A CDS       25683224//22608085 chr4:49653131-49653132(+) m6A CDS       25683224//22608085 chr4:49653173-49653174(+) m6A CDS       25683224//22608085 chr4:49653271-49653272(+) m6A CDS       25683224//25412662//24981863//22608085 chr4:49654219-49654220(+) m6A CDS       25683224//25412662//24981863//22608085 chr4:49654286-49654287(+) m6A CDS       25683224//25412662//24981863//22608085 chr4:49654493-49654494(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:49654540-49654541(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:49654561-49654562(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:49655414-49655415(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:49655443-49655444(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:49655459-49655460(+) m6A CDS       25683224//25412662//24981863 chr4:49655504-49655505(+) m6A CDS       25412662 chr4:49655995-49655996(+) m6A 3'UTR       24981863//25569111 chr4:49656052-49656053(+) m6A 3'UTR       24981863//25569111 chr4:49656080-49656081(+) m6A 3'UTR       24981863//25456834//25569111 chr4:49656115-49656116(+) m6A 3'UTR       24981863//25456834//25569111 chr4:49656129-49656130(+) m6A 3'UTR       24981863//25456834//25569111 chr4:49656144-49656145(+) m6A 3'UTR       24981863//25456834//25569111 chr4:49656155-49656156(+) m6A 3'UTR       24981863//25456834//25569111 chr4:49656157-49656158(+) Y 3'UTR//exon       26075521 chr4:49656247-49656248(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Rnf20

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar