Basic Information:

  VIRBase ID:  

VHID00598238

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Pdzd8:  NM_001033222     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Pdzd8
miRBase Accession/Entrez ID	MIMAT0005540	107368
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A630041P07Rik//AV329468//AW228944//Pdzk//Pdzk8

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pdzd8	chr19:59297863-59297864(-) m6A 3'UTR       24981863 chr19:59297899-59297900(-) m6A 3'UTR       24981863 chr19:59297966-59297967(-) m6A 3'UTR       24981863//22608085 chr19:59297972-59297973(-) m6A 3'UTR       24981863//22608085 chr19:59297987-59297988(-) m6A 3'UTR       24981863//25569111//22608085 chr19:59298099-59298100(-) m6A 3'UTR       25569111 chr19:59298294-59298295(-) m6A 3'UTR       24981863 chr19:59298315-59298316(-) m6A 3'UTR       24981863 chr19:59298407-59298408(-) m6A 3'UTR       24981863//25456834//26404942//22608085 chr19:59298418-59298419(-) m6A 3'UTR       24981863//25456834//26404942//22608085 chr19:59298443-59298444(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr19:59298477-59298478(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr19:59298519-59298520(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59298586-59298587(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59298605-59298606(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59298624-59298625(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59298661-59298662(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59299367-59299368(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr19:59299484-59299485(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:59299580-59299581(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr19:59299610-59299611(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr19:59299637-59299638(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr19:59299658-59299659(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr19:59299680-59299681(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr19:59299738-59299739(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr19:59299797-59299798(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr19:59299831-59299832(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:59300003-59300004(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300024-59300025(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300060-59300061(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300080-59300081(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300092-59300093(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300106-59300107(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300113-59300114(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300127-59300128(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300196-59300197(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300255-59300256(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300260-59300261(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300276-59300277(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300286-59300287(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300291-59300292(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300325-59300326(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300400-59300401(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr19:59300438-59300439(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr19:59300467-59300468(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300491-59300492(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300545-59300546(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300582-59300583(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300587-59300588(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300682-59300683(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300713-59300714(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300719-59300720(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300744-59300745(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300782-59300783(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr19:59300852-59300853(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300901-59300902(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59300975-59300976(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301097-59301098(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301131-59301132(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301155-59301156(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301223-59301224(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301235-59301236(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301244-59301245(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301270-59301271(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301279-59301280(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301295-59301296(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301319-59301320(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr19:59301388-59301389(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr19:59301441-59301442(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301459-59301460(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301485-59301486(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301506-59301507(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301512-59301513(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301521-59301522(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301605-59301606(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59301653-59301654(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr19:59305213-59305214(-) m6A CDS       25683224//24981863//25569111 chr19:59305226-59305227(-) m6A CDS       25683224//24981863//25569111 chr19:59305284-59305285(-) m6A CDS       25683224//24981863//25569111 chr19:59315278-59315279(-) m6A CDS       - chr19:59315328-59315329(-) m6A CDS       22608085 chr19:59344847-59344848(-) m6A CDS       25412662//24981863//25569111 chr19:59344964-59344965(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr19:59345115-59345116(-) m6A CDS       25412662//24981863//25569111 chr19:59345193-59345194(-) m6A CDS       25412662//24981863//25569111//22608085 chr19:59345258-59345259(-) m6A CDS       25412662//24981863//25569111//22608085 chr19:59345310-59345311(-) m6A CDS       25412662//24981863//25569111//22608085 chr19:59345500-59345501(-) m6A CDS       25412662//24981863//25569111 chr19:59345730-59345731(-) m6A 5'UTR       25456834//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Pdzd8

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar