Basic Information:

  VIRBase ID:  

VHID00598092

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Nipa2:  NM_001256132     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Nipa2
miRBase Accession/Entrez ID	MIMAT0005540	93790
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2600017P10Rik//3830408P04Rik//AB041581

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nipa2	chr7:55931995-55931996(-) m6A 3'UTR       24981863//22608085 chr7:55932034-55932035(-) m6A 3'UTR       24981863//22608085 chr7:55932051-55932052(-) m6A 3'UTR       24981863//22608085 chr7:55932912-55932913(-) m6A 3'UTR       24981863//25569111 chr7:55932966-55932967(-) m6A CDS       24981863//25569111 chr7:55933151-55933152(-) m6A CDS       25683224//25456834//24981863 chr7:55933273-55933274(-) m6A CDS//exon       25456834//24981863//25569111 chr7:55933285-55933286(-) m6A CDS//exon       25456834//24981863//25569111 chr7:55933465-55933466(-) m6A CDS//exon       25456834//24981863//25569111 chr7:55933473-55933474(-) m6A CDS//exon       25456834//24981863//25569111 chr7:55933485-55933486(-) m6A CDS//exon       25456834//24981863//25569111 chr7:55935833-55935834(-) m6A CDS//exon       24981863 chr7:55961542-55961543(-) Y 5'UTR//exon//intron       26075521 chr7:55962333-55962334(-) m6A 5'UTR//exon//intron       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nipa2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Nipa2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar