Basic Information:

  VIRBase ID:  

VHID00597784

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Atat1:  NM_001142744     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Atat1
miRBase Accession/Entrez ID	MIMAT0005540	73242
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	0610011P08Rik//2610008K08Rik//2610110G12Rik//3110080J08Rik//MEC-17//Mec17//TAT

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atat1	chr17:35897774-35897775(-) m6A 3'UTR//CDS//exon       24981863 chr17:35897801-35897802(-) m6A 3'UTR//CDS//exon       24981863//25569111 chr17:35897856-35897857(-) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr17:35900576-35900577(-) Y 3'UTR//exon//intron       26075521 chr17:35900648-35900649(-) m6A 3'UTR//intron       24981863//22608085 chr17:35900692-35900693(-) m6A 3'UTR//intron       24981863//22608085 chr17:35900753-35900754(-) m6A 3'UTR//intron       24981863//22608085 chr17:35900831-35900832(-) m6A 3'UTR//intron       24981863 chr17:35901574-35901575(-) m6A 3'UTR//CDS       25412662 chr17:35902014-35902015(-) m6A 3'UTR//CDS//exon//intron       25412662 chr17:35908914-35908915(-) Y 3'UTR//CDS//exon       26075521 chr17:35909591-35909592(-) m6A 5'UTR//intron       25412662//25569111 chr17:35909864-35909865(-) m6A 3'UTR//intron       25569111 chr17:35909877-35909878(-) m6A 3'UTR//intron       25412662//25569111 chr17:35909915-35909916(-) m6A 3'UTR//intron       25412662//24981863//25569111 chr17:35909944-35909945(-) m6A CDS//exon       25412662//24981863//25569111 chr17:35909979-35909980(-) m6A CDS//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Atat1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar