Basic Information:

  VIRBase ID:  

VHID00597688

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Dcaf7:  NM_027946     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Dcaf7
miRBase Accession/Entrez ID	MIMAT0005540	71833
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1700012F10Rik//2610037L01Rik//C86529//HAN11//Wdr6//Wdr68

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dcaf7	chr11:106036941-106036942(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr11:106036985-106036986(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr11:106037038-106037039(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr11:106037046-106037047(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr11:106037174-106037175(+) m6A CDS//exon       25683224//24981863//25569111 chr11:106037190-106037191(+) m6A CDS//exon       25683224//24981863//25569111 chr11:106037208-106037209(+) m6A CDS//exon       25683224//24981863//25569111 chr11:106046739-106046740(+) m6A CDS//exon       24981863//25569111 chr11:106054739-106054740(+) m6A CDS       24981863//25569111 chr11:106054931-106054932(+) m6A 3'UTR       25683224//24981863//25569111 chr11:106055031-106055032(+) m6A 3'UTR       25683224//24981863//25569111 chr11:106055945-106055946(+) m6A 3'UTR       24981863//26404942//22608085 chr11:106055958-106055959(+) m6A 3'UTR       24981863//26404942//22608085 chr11:106055968-106055969(+) m6A 3'UTR       24981863//26404942//22608085 chr11:106056010-106056011(+) m6A 3'UTR       24981863//26404942//22608085 chr11:106056031-106056032(+) m6A 3'UTR       24981863//26404942//22608085 chr11:106057377-106057378(+) m6A 3'UTR       22608085 chr11:106057498-106057499(+) m6A 3'UTR       24981863//22608085 chr11:106057512-106057513(+) m6A 3'UTR       24981863//22608085 chr11:106057551-106057552(+) m6A 3'UTR       24981863//22608085 chr11:106057881-106057882(+) m6A 3'UTR       22608085 chr11:106057900-106057901(+) m6A 3'UTR       22608085 chr11:106057916-106057917(+) m6A 3'UTR       22608085 chr11:106058010-106058011(+) m6A 3'UTR       24981863//22608085 chr11:106058354-106058355(+) m6A 3'UTR       25569111//22608085 chr11:106058596-106058597(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr11:106058624-106058625(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr11:106058684-106058685(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr11:106058869-106058870(+) m6A 3'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Dcaf7	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Dcaf7

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar