Basic Information:

  VIRBase ID:  

VHID00597676

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Stk11ip:  NM_027886     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Stk11ip
miRBase Accession/Entrez ID	MIMAT0005540	71728
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200014D22Rik//BB131189//L//LIP1//LKB//LKB1IP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Stk11ip	chr1:75521832-75521833(+) m6A CDS//exon       25683224//25412662 chr1:75524745-75524746(+) m6A CDS//exon       25683224//25412662 chr1:75524758-75524759(+) m6A CDS//exon       25683224//25412662 chr1:75524789-75524790(+) m6A CDS//exon       25412662 chr1:75524823-75524824(+) m6A CDS//exon       25412662 chr1:75527082-75527083(+) m6A CDS//exon       25683224//22608085 chr1:75527122-75527123(+) m6A CDS//exon       25683224//22608085 chr1:75527144-75527145(+) m6A CDS//exon       25683224//22608085 chr1:75527239-75527240(+) m6A exon//intron       25683224 chr1:75527262-75527263(+) m6A exon//intron       25683224 chr1:75528935-75528936(+) m6A CDS//exon       25683224 chr1:75529005-75529006(+) m6A CDS//exon       25683224//24981863 chr1:75529038-75529039(+) m6A CDS//exon       25683224//24981863 chr1:75529075-75529076(+) m6A CDS//exon       25683224//25412662//24981863 chr1:75529083-75529084(+) m6A CDS//exon       25683224//25412662//24981863 chr1:75529190-75529191(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr1:75529219-75529220(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr1:75529450-75529451(+) m6A CDS//exon       25683224//24981863 chr1:75535399-75535400(+) m6A CDS//exon       25683224//22608085 chr1:75536192-75536193(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr1:75536199-75536200(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr1:75536221-75536222(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr1:75536227-75536228(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr1:75536380-75536381(+) m6A 3'UTR//exon       24981863 chr1:75536444-75536445(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Stk11ip	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Stk11ip

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar