Detail Information

Basic Information:


  VIRBase ID:  

VHID00597661

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Bbs7:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Bbs7
miRBase
Accession/Entrez ID
MIMAT0005540 71492
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 8430406N16Rik

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Bbs7
chr3:36573431-36573432(-) m6A 3'UTR       24981863
chr3:36573462-36573463(-) m6A 3'UTR       25683224//24981863
chr3:36573480-36573481(-) m6A 3'UTR       25683224//24981863
chr3:36573519-36573520(-) m6A CDS       24981863
chr3:36573565-36573566(-) m6A CDS       24981863
chr3:36604448-36604449(-) m6A CDS       25683224//22608085
chr3:36604478-36604479(-) m6A CDS       25683224//22608085
chr3:36604505-36604506(-) m6A CDS       25683224//22608085
chr3:36607542-36607543(-) m6A CDS       25683224//22608085
chr3:36607614-36607615(-) m6A CDS       25683224//22608085
chr3:36607638-36607639(-) m6A CDS       25683224//22608085
chr3:36610342-36610343(-) m6A CDS//exon       25683224//24981863
chr3:36612029-36612030(-) m6A CDS//exon//intron       25683224//25569111
chr3:36612055-36612056(-) m6A CDS//exon//intron       25683224//25569111
chr3:36613259-36613260(-) m6A CDS//exon       25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Bbs7

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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