Detail Information

Basic Information:


  VIRBase ID:  

VHID00597326

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Spryd4:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Spryd4
miRBase
Accession/Entrez ID
MIMAT0005540 66701
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4633402N23Rik//AA114801

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Spryd4
chr10:128209914-128209915(-) m6A 3'UTR       25456834//24981863
chr10:128210038-128210039(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210072-128210073(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210082-128210083(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210150-128210151(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210185-128210186(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210269-128210270(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210280-128210281(-) m6A 3'UTR       25456834//24981863//25569111
chr10:128210593-128210594(-) m6A 3'UTR       25569111
chr10:128210841-128210842(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr10:128210876-128210877(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960
chr10:128210944-128210945(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:128211009-128211010(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:128211141-128211142(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr10:128211153-128211154(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr10:128211215-128211216(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:128211237-128211238(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:128211296-128211297(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:128211302-128211303(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:128211377-128211378(-) m6A CDS       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Spryd4

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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