Basic Information:

  VIRBase ID:  

VHID00597251

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Twsg1:  NM_023053     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Twsg1
miRBase Accession/Entrez ID	MIMAT0005540	65960
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1810013J15Rik//9030422N06Rik//AW552143//D17Ertd403//D17Ertd403e//Ts//Tsg//Twg

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Twsg1	chr17:65923201-65923202(-) m6A 3'UTR       24981863 chr17:65923276-65923277(-) m6A 3'UTR       24981863 chr17:65925002-65925003(-) Y 3'UTR//exon       26075521 chr17:65925156-65925157(-) m6A 3'UTR       25412662//24981863//25569111 chr17:65925181-65925182(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr17:65925248-65925249(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr17:65925327-65925328(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr17:65925349-65925350(-) m6A 3'UTR       25683224//24981863//25569111 chr17:65925410-65925411(-) m6A 3'UTR       25683224//24981863//25569111 chr17:65925479-65925480(-) m6A 3'UTR       25683224//25569111 chr17:65926264-65926265(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:65926297-65926298(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:65926313-65926314(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:65929614-65929615(-) m6A CDS       25683224//24981863//25569111 chr17:65929621-65929622(-) m6A CDS       25683224//24981863//25569111 chr17:65929641-65929642(-) m6A CDS       25683224//24981863//25569111 chr17:65929686-65929687(-) m6A CDS       25683224//24981863//25569111 chr17:65929692-65929693(-) m6A CDS       25683224//24981863//25569111 chr17:65951149-65951150(-) m6A 5'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Twsg1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Twsg1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar