Basic Information:

  VIRBase ID:  

VHID00597006

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Rcn3:  NM_001355045     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Rcn3
miRBase Accession/Entrez ID	MIMAT0005540	52377
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6030455P07Rik//D530026G20Rik//D7Ertd671//D7Ertd671e//RL//RLP49

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rcn3	chr7:45082986-45082987(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:45083092-45083093(-) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:45083113-45083114(-) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:45083167-45083168(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr7:45083173-45083174(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr7:45083211-45083212(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr7:45083238-45083239(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr7:45083283-45083284(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr7:45083322-45083323(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr7:45083569-45083570(-) m6A CDS//exon//intron       25683224//25412662//25569111 chr7:45083617-45083618(-) m6A CDS//exon//intron       25683224//25412662//25569111 chr7:45083677-45083678(-) m6A CDS//exon//intron       25683224//25412662 chr7:45083714-45083715(-) m6A CDS//exon//intron       25683224//25412662 chr7:45083730-45083731(-) m6A CDS//exon//intron       25683224//25412662 chr7:45083761-45083762(-) m6A CDS//exon//intron       25683224//25412662 chr7:45083831-45083832(-) m6A exon//intron       25683224//25412662//24981863//25569111 chr7:45084938-45084939(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:45084950-45084951(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:45084960-45084961(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:45086677-45086678(-) m6A CDS       25683224//25412662//24981863 chr7:45086804-45086805(-) m6A CDS       25683224//25412662 chr7:45088559-45088560(-) m6A CDS       25683224//25412662//25569111 chr7:45088667-45088668(-) m6A CDS       25683224//25412662//25569111 chr7:45088688-45088689(-) m6A CDS       25683224//25412662//25569111 chr7:45091370-45091371(-) m6A exon//intron       25683224//25412662//25569111 chr7:45091375-45091376(-) m6A exon//intron       25683224//25412662//25569111 chr7:45091472-45091473(-) m6A CDS//exon       25569111 chr7:45091570-45091571(-) m6A CDS//exon       25569111 chr7:45091601-45091602(-) m6A CDS//exon       24981863//25569111 chr7:45091685-45091686(-) m6A 5'UTR//exon       24981863//25569111 chr7:45092168-45092169(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Rcn3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar