Basic Information:

  VIRBase ID:  

VHID00596653

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Srebf1:  NM_001313979     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Srebf1
miRBase Accession/Entrez ID	MIMAT0005540	20787
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	ADD-//ADD1//bHLHd//bHLHd1//SRE//SREB//SREBP//SREBP1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Srebf1	chr11:60199656-60199657(-) m6A 3'UTR       25683224 chr11:60199727-60199728(-) m6A 3'UTR       25683224//22608085 chr11:60199845-60199846(-) m6A 3'UTR       25412662//25569111//26404942//22608085 chr11:60199898-60199899(-) m6A 3'UTR       25412662//25569111//26404942 chr11:60199920-60199921(-) m6A 3'UTR       25412662//25569111//26404942 chr11:60199941-60199942(-) m6A CDS       25412662//25569111//22608085 chr11:60199976-60199977(-) m6A CDS       25412662//25569111//22608085 chr11:60200482-60200483(-) m6A CDS//exon       25412662//22608085 chr11:60200727-60200728(-) m6A CDS//exon       25412662//22608085 chr11:60201354-60201355(-) m6A CDS       25412662//22608085 chr11:60201407-60201408(-) m6A CDS//exon       25412662//22608085 chr11:60201480-60201481(-) m6A exon//intron       25412662 chr11:60201507-60201508(-) m6A exon//intron       25412662 chr11:60201585-60201586(-) m6A CDS//exon       25412662 chr11:60201705-60201706(-) m6A CDS//exon       25412662 chr11:60202161-60202162(-) m6A CDS//exon       25412662 chr11:60202200-60202201(-) m6A CDS//exon       25412662 chr11:60202223-60202224(-) m6A CDS//exon       25412662 chr11:60202310-60202311(-) m6A exon//intron       25412662 chr11:60202766-60202767(-) m6A CDS//exon       25412662 chr11:60202817-60202818(-) m6A CDS//exon       25412662 chr11:60203428-60203429(-) m6A CDS//exon       25412662 chr11:60203503-60203504(-) m6A CDS//exon       25412662 chr11:60203533-60203534(-) m6A CDS//exon       25412662 chr11:60203822-60203823(-) m6A CDS//exon       25683224//22608085 chr11:60203831-60203832(-) m6A CDS//exon       25683224//22608085 chr11:60203876-60203877(-) m6A CDS//exon       25683224//24981863//22608085 chr11:60203921-60203922(-) m6A CDS//exon       25683224//22608085 chr11:60203962-60203963(-) m6A CDS//exon       25683224//22608085 chr11:60204222-60204223(-) m6A CDS//exon       25683224//22608085 chr11:60204530-60204531(-) m6A CDS//exon       25683224//25412662//22608085 chr11:60204588-60204589(-) m6A CDS//exon       25683224//25412662//22608085 chr11:60205150-60205151(-) m6A CDS//exon       25683224//25412662//22608085 chr11:60206021-60206022(-) m6A CDS//exon       25412662//22608085 chr11:60206027-60206028(-) m6A CDS//exon       25412662//22608085//22575960 chr11:60206058-60206059(-) m6A CDS//exon       25412662//22575960 chr11:60206076-60206077(-) m6A CDS//exon       25412662//22575960 chr11:60206228-60206229(-) m6A CDS//exon       25412662 chr11:60206252-60206253(-) m6A CDS//exon       25412662//22608085 chr11:60206278-60206279(-) m6A CDS//exon       25412662//22608085 chr11:60206429-60206430(-) m6A CDS//exon       25412662//22608085 chr11:60206557-60206558(-) m6A CDS//exon       25412662//24981863//22608085 chr11:60206570-60206571(-) m6A CDS//exon       25412662//24981863//22608085 chr11:60206927-60206928(-) m6A CDS//exon       25412662//24981863//25569111//22608085 chr11:60207087-60207088(-) m6A CDS//exon//intron       24981863//25569111 chr11:60207175-60207176(-) m6A CDS//exon//intron       25412662//24981863//25569111 chr11:60207182-60207183(-) m6A CDS//exon//intron       25412662//24981863//25569111 chr11:60207229-60207230(-) m6A CDS//exon//intron       25412662//24981863//25569111 chr11:60210364-60210365(-) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr11:60220478-60220479(-) m6A CDS//intron       25412662//24981863//25569111 chr11:60220483-60220484(-) m6A CDS//intron       25412662//24981863//25569111 chr11:60220507-60220508(-) m6A CDS//intron       25412662//24981863//25569111 chr11:60220591-60220592(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr11:60222550-60222551(-) m6A exon       25412662//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Srebf1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar