Basic Information:

  VIRBase ID:  

VHID00596398

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Npm1:  NM_001252261     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Npm1
miRBase Accession/Entrez ID	MIMAT0005540	18148
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	B23//NO//NO38//Npm

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Npm1	chr11:33152529-33152530(-) m6A 3'UTR//exon       25456834//22608085 chr11:33152550-33152551(-) m6A 3'UTR//exon       25456834//22608085 chr11:33152588-33152589(-) m6A 3'UTR//exon       25456834//22608085 chr11:33152799-33152800(-) m6A 3'UTR//exon       24981863//22608085 chr11:33154104-33154105(-) m6A exon//intron       25412662//24981863//25569111 chr11:33154135-33154136(-) m6A exon//intron       25412662//24981863//25569111 chr11:33155124-33155125(-) m6A 3'UTR//intron       24981863 chr11:33155151-33155152(-) m6A 3'UTR//intron       24981863 chr11:33155210-33155211(-) m6A 3'UTR//intron       24981863 chr11:33155330-33155331(-) m6A 3'UTR//intron       24981863 chr11:33155337-33155338(-) m6A 3'UTR//intron       24981863 chr11:33156036-33156037(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr11:33156053-33156054(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr11:33156064-33156065(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr11:33156073-33156074(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr11:33156083-33156084(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr11:33156684-33156685(-) m6A CDS//exon//intron       25456834//25412662//24981863//25569111 chr11:33156691-33156692(-) m6A CDS//exon//intron       25456834//25412662//24981863//25569111 chr11:33156706-33156707(-) m6A CDS//exon//intron       25456834//25412662//24981863//25569111 chr11:33157016-33157017(-) m6A CDS//exon       25456834//24981863//25569111 chr11:33157227-33157228(-) m6A exon//intron       24981863//25456834 chr11:33159983-33159984(-) m6A CDS       25412662//24981863//25456834 chr11:33160390-33160391(-) m6A CDS       25412662//24981863 chr11:33160840-33160841(-) m6A CDS       25412662//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Npm1	Axon Motor neurons     24152552 Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Npm1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar