Basic Information:

  VIRBase ID:  

VHID00596387

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Nin:  NR_104398     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Nin
miRBase Accession/Entrez ID	MIMAT0005540	18080
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	3110068G20Rik//AI385615//AU024711//mKIAA1565

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nin	chr12:70012997-70012998(-) m6A 3'UTR       25456834//24981863//25569111 chr12:70013002-70013003(-) m6A 3'UTR       25456834//24981863//25569111 chr12:70013062-70013063(-) m6A 3'UTR       25456834//24981863//25569111 chr12:70013079-70013080(-) m6A 3'UTR       25456834//24981863//25569111 chr12:70013096-70013097(-) m6A 3'UTR       25456834//24981863//25569111 chr12:70013314-70013315(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr12:70013328-70013329(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr12:70013401-70013402(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70013408-70013409(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70013428-70013429(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70013497-70013498(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013522-70013523(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013612-70013613(-) m6A 3'UTR       25456834//24981863//22608085 chr12:70013676-70013677(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr12:70013716-70013717(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013816-70013817(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013839-70013840(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013852-70013853(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70013995-70013996(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014013-70014014(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014035-70014036(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014061-70014062(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014098-70014099(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014147-70014148(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr12:70014199-70014200(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr12:70014347-70014348(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014432-70014433(-) m6A 3'UTR       24981863//22608085 chr12:70014463-70014464(-) m6A 3'UTR       24981863//22608085 chr12:70014513-70014514(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr12:70014660-70014661(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:70014792-70014793(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70014856-70014857(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr12:70014869-70014870(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr12:70014937-70014938(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70014945-70014946(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70017575-70017576(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70017588-70017589(-) m6A CDS       25412662//24981863 chr12:70017608-70017609(-) m6A CDS       25412662//24981863 chr12:70017626-70017627(-) m6A CDS       24981863 chr12:70017632-70017633(-) m6A CDS       24981863 chr12:70017674-70017675(-) m6A CDS       24981863 chr12:70017681-70017682(-) m6A CDS       24981863 chr12:70020847-70020848(-) m6A CDS       25412662//22608085 chr12:70020856-70020857(-) m6A CDS       25412662//22608085 chr12:70020861-70020862(-) m6A CDS       25412662//22608085 chr12:70028095-70028096(-) m6A CDS       25683224//22608085 chr12:70028114-70028115(-) m6A CDS       25683224//22608085 chr12:70028123-70028124(-) m6A CDS       25683224//22608085 chr12:70028175-70028176(-) m6A CDS       25683224//22608085 chr12:70030009-70030010(-) m6A CDS       25683224//22608085 chr12:70030124-70030125(-) m6A CDS       25683224//22608085 chr12:70030941-70030942(-) m6A CDS       24981863//22608085 chr12:70031710-70031711(-) m6A CDS       22608085 chr12:70038660-70038661(-) m6A CDS       24981863 chr12:70038667-70038668(-) m6A CDS       24981863 chr12:70038677-70038678(-) m6A CDS       24981863 chr12:70038686-70038687(-) m6A CDS       24981863 chr12:70038700-70038701(-) m6A CDS       24981863 chr12:70038728-70038729(-) m6A CDS       24981863 chr12:70042139-70042140(-) m6A CDS       25683224//24981863 chr12:70042179-70042180(-) m6A CDS       25683224//24981863 chr12:70042304-70042305(-) m6A CDS       25683224//24981863//25569111 chr12:70042344-70042345(-) m6A CDS       25683224//24981863//25569111 chr12:70042389-70042390(-) m6A CDS       25683224//24981863//25569111 chr12:70042417-70042418(-) m6A CDS       25683224//24981863//25569111 chr12:70042501-70042502(-) m6A CDS       25683224//24981863 chr12:70042567-70042568(-) m6A CDS       25683224//24981863 chr12:70042577-70042578(-) m6A CDS       25683224//24981863 chr12:70042611-70042612(-) m6A CDS       25683224//24981863 chr12:70042694-70042695(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042715-70042716(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042842-70042843(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042874-70042875(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042899-70042900(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042955-70042956(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70042973-70042974(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043007-70043008(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043012-70043013(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043037-70043038(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043091-70043092(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043104-70043105(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70043112-70043113(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70043121-70043122(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70043142-70043143(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70043167-70043168(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70043197-70043198(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043214-70043215(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043229-70043230(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043270-70043271(-) m6A CDS       25683224//24981863//25569111 chr12:70043282-70043283(-) m6A CDS       25683224//24981863//25569111 chr12:70043291-70043292(-) m6A CDS       25683224//24981863//25569111 chr12:70043589-70043590(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70043802-70043803(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043810-70043811(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043889-70043890(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043898-70043899(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043943-70043944(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043953-70043954(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70043972-70043973(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70044105-70044106(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70044114-70044115(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70044161-70044162(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70044238-70044239(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70045160-70045161(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70045175-70045176(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70045282-70045283(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:70045301-70045302(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:70045427-70045428(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70045500-70045501(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:70045589-70045590(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:70047156-70047157(-) m6A CDS       25683224//25412662//24981863//22608085 chr12:70047170-70047171(-) m6A CDS       25683224//25412662//24981863//22608085 chr12:70047186-70047187(-) m6A CDS       25683224//25412662//24981863//22608085 chr12:70049060-70049061(-) m6A CDS       25683224//25412662//22608085 chr12:70049076-70049077(-) m6A CDS       25683224//25412662//22608085 chr12:70049090-70049091(-) m6A CDS       25683224//25412662//22608085 chr12:70049126-70049127(-) m6A CDS       25683224//22608085 chr12:70049151-70049152(-) m6A CDS       25683224//25412662//22608085 chr12:70051231-70051232(-) m6A CDS       25683224//25412662//24981863 chr12:70051245-70051246(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70054409-70054410(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70054453-70054454(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:70054495-70054496(-) m6A CDS       25683224//24981863//25569111//22608085 chr12:70054513-70054514(-) m6A CDS       25683224//24981863//25569111//22608085 chr12:70054558-70054559(-) m6A CDS       25683224//24981863//25569111//22608085 chr12:70054917-70054918(-) m6A CDS       25683224//24981863//25569111 chr12:70054923-70054924(-) m6A CDS       25683224//24981863//25569111 chr12:70055377-70055378(-) m6A CDS       25683224//24981863 chr12:70055417-70055418(-) m6A CDS       25683224//24981863 chr12:70055890-70055891(-) m6A CDS       25683224//24981863 chr12:70055917-70055918(-) m6A CDS       25683224//22608085 chr12:70061180-70061181(-) m6A CDS       25683224//22608085 chr12:70061208-70061209(-) m6A CDS       25683224//22608085 chr12:70061258-70061259(-) m6A CDS       25683224//22608085 chr12:70061274-70061275(-) m6A CDS       25683224//22608085 chr12:70061322-70061323(-) m6A CDS       25683224//22608085 chr12:70062718-70062719(-) m6A CDS       25683224//22608085 chr12:70078121-70078122(-) m6A CDS       25683224//22608085 chr12:70090568-70090569(-) m6A CDS       25683224//22608085 chr12:70102666-70102667(-) m6A CDS       25683224//22608085 chr12:70102760-70102761(-) m6A CDS       25683224//22608085 chr12:70102813-70102814(-) m6A CDS       25683224//25412662 chr12:70111857-70111858(-) m6A 5'UTR       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nin	Centrosome Ependymal cells|mNSC     33649372 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Nin

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar