Basic Information:

  VIRBase ID:  

VHID00596279

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Arhgef1:  NM_001130150     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Arhgef1
miRBase Accession/Entrez ID	MIMAT0005540	16801
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	L//Lbc//Lbcl2//Lsc

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgef1	chr7:24903059-24903060(+) m6A 5'UTR       25412662//24981863//25569111 chr7:24903121-24903122(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr7:24903192-24903193(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr7:24903229-24903230(+) m6A 5'UTR//intron       25412662//24981863 chr7:24903289-24903290(+) m6A 5'UTR//intron       25412662 chr7:24903338-24903339(+) m6A 5'UTR//intron       25412662 chr7:24904106-24904107(+) m6A exon//intron       25412662 chr7:24904157-24904158(+) m6A exon//intron       25412662 chr7:24904223-24904224(+) m6A exon//intron       25412662 chr7:24904243-24904244(+) m6A exon//intron       25412662 chr7:24904427-24904428(+) m6A 5'UTR//exon//intron       25412662//25569111 chr7:24908326-24908327(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr7:24908417-24908418(+) m6A CDS//exon//intron       25412662 chr7:24909008-24909009(+) m6A exon//intron       24981863 chr7:24909021-24909022(+) m6A exon//intron       24981863 chr7:24909037-24909038(+) m6A exon//intron       24981863 chr7:24909141-24909142(+) m6A exon//intron       24981863 chr7:24909232-24909233(+) m6A exon//intron       24981863 chr7:24909240-24909241(+) m6A exon//intron       24981863 chr7:24909263-24909264(+) m6A exon//intron       24981863 chr7:24909286-24909287(+) m6A exon//intron       24981863 chr7:24912653-24912654(+) m6A CDS//exon       25412662//22608085 chr7:24912699-24912700(+) m6A CDS//exon       25412662//22608085 chr7:24912731-24912732(+) m6A CDS//exon       25412662//22608085 chr7:24912796-24912797(+) m6A CDS//exon//intron       25412662 chr7:24913450-24913451(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr7:24913463-24913464(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr7:24913481-24913482(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr7:24913645-24913646(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr7:24913655-24913656(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr7:24913698-24913699(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916821-24916822(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916854-24916855(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916859-24916860(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916868-24916869(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916876-24916877(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916881-24916882(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916917-24916918(+) m6A CDS//exon//intron       25683224//25412662 chr7:24916936-24916937(+) m6A CDS//exon//intron       25683224//25412662 chr7:24917981-24917982(+) m6A CDS//exon//intron       25683224//25412662 chr7:24917992-24917993(+) m6A CDS//exon//intron       25683224//25412662 chr7:24918125-24918126(+) m6A exon//intron       25412662 chr7:24919299-24919300(+) m6A CDS//exon//intron       25412662 chr7:24919305-24919306(+) m6A CDS//exon//intron       25412662 chr7:24919417-24919418(+) m6A exon//intron       25412662 chr7:24919433-24919434(+) m6A exon//intron       25412662 chr7:24919469-24919470(+) m6A exon//intron       25683224//25412662 chr7:24919478-24919479(+) m6A exon//intron       25683224//25412662 chr7:24919502-24919503(+) m6A exon//intron       25683224//25412662 chr7:24919518-24919519(+) m6A exon//intron       25683224//25412662 chr7:24919675-24919676(+) m6A CDS//exon//intron       25683224//25412662 chr7:24919681-24919682(+) m6A CDS//exon//intron       25683224//25412662 chr7:24919690-24919691(+) m6A CDS//exon//intron       25412662 chr7:24919708-24919709(+) m6A CDS//exon//intron       25412662 chr7:24919722-24919723(+) m6A CDS//exon//intron       25412662 chr7:24921978-24921979(+) m6A CDS//exon//intron       25412662 chr7:24922355-24922356(+) m6A CDS//exon//intron       25412662 chr7:24922849-24922850(+) m6A CDS//exon//intron       25412662//24981863 chr7:24922915-24922916(+) m6A CDS//exon       25412662//24981863 chr7:24923102-24923103(+) m6A CDS//exon       25412662//24981863 chr7:24923391-24923392(+) m6A CDS//exon       25412662 chr7:24923445-24923446(+) m6A exon//intron       25412662 chr7:24923722-24923723(+) m6A CDS//exon       25412662 chr7:24924828-24924829(+) m6A CDS//exon       25412662//22608085 chr7:24924863-24924864(+) m6A CDS//exon       25412662//22608085 chr7:24924997-24924998(+) m6A CDS//exon       25412662//24981863 chr7:24925041-24925042(+) m6A CDS//exon       25412662//24981863 chr7:24925260-24925261(+) m6A CDS//exon       25412662//24981863 chr7:24925405-24925406(+) m6A CDS//exon       25412662//24981863 chr7:24925443-24925444(+) m6A CDS//exon       25412662//24981863 chr7:24925822-24925823(+) m6A CDS//exon//intron       25412662//22608085 chr7:24926119-24926120(+) m6A CDS//exon       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Arhgef1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar