Detail Information

Basic Information:


  VIRBase ID:  

VHID00596211

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:           Irak1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m21-1 Irak1
miRBase
Accession/Entrez ID		 MIMAT0005540 16179
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AA408924//Il//Il1rak//IRA//IRAK//IRAK-1//IRAK1-S//IRAK1b//mP//mPLK//P//Plpk

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Irak1
chrX:74014504-74014505(-) m6A 3'UTR//intron       25569111//22608085
chrX:74014531-74014532(-) m6A 3'UTR//intron       25569111//22608085
chrX:74014710-74014711(-) m6A 3'UTR//intron       25569111
chrX:74014841-74014842(-) m6A 3'UTR//exon//intron       24981863//25456834//25569111
chrX:74014852-74014853(-) m6A 3'UTR//exon//intron       24981863//25456834//25569111
chrX:74014938-74014939(-) m6A 3'UTR//exon//intron       24981863//25456834//25569111
chrX:74014963-74014964(-) m6A 3'UTR//exon//intron       24981863//25456834//25569111
chrX:74014970-74014971(-) m6A 3'UTR//exon//intron       24981863//25456834//25569111
chrX:74015019-74015020(-) m6A 3'UTR//exon//intron       24981863//25456834
chrX:74015112-74015113(-) Y 3'UTR//exon//intron       26075521
chrX:74015159-74015160(-) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085
chrX:74015166-74015167(-) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085
chrX:74015254-74015255(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chrX:74015271-74015272(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chrX:74015277-74015278(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chrX:74015300-74015301(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chrX:74015365-74015366(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111
chrX:74015412-74015413(-) m6A 3'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111
chrX:74015469-74015470(-) m6A 3'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111
chrX:74015487-74015488(-) m6A 3'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111
chrX:74016659-74016660(-) m6A CDS//exon//intron       25683224//24981863//22608085
chrX:74017382-74017383(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111
chrX:74017425-74017426(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111
chrX:74017499-74017500(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111
chrX:74017903-74017904(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chrX:74017954-74017955(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chrX:74018009-74018010(-) m6A CDS//intron       24981863//25569111
chrX:74018225-74018226(-) m6A CDS//exon//intron       25683224//24981863//25569111//22608085
chrX:74018232-74018233(-) m6A CDS//exon//intron       25683224//24981863//25569111//22608085
chrX:74018361-74018362(-) m6A CDS//exon//intron       25683224//25569111//22608085
chrX:74019910-74019911(-) m6A CDS//exon//intron       25683224//22608085
chrX:74019925-74019926(-) m6A CDS//exon//intron       25683224//22608085
chrX:74019952-74019953(-) m6A CDS//exon//intron       25683224//22608085
chrX:74020352-74020353(-) m6A CDS//exon       25683224//22608085
chrX:74020371-74020372(-) m6A CDS//exon       25683224//22608085
chrX:74022317-74022318(-) m6A CDS//exon//intron       24981863//22608085
chrX:74022349-74022350(-) m6A CDS//exon//intron       24981863
chrX:74022439-74022440(-) m6A exon//intron       24981863
chrX:74022450-74022451(-) m6A exon//intron       24981863
chrX:74022481-74022482(-) m6A CDS//exon       24981863
chrX:74022556-74022557(-) m6A CDS//exon       24981863
chrX:74022711-74022712(-) m6A exon//intron       25683224//24981863//22608085
chrX:74022743-74022744(-) m6A exon//intron       25683224//24981863//22608085
chrX:74022799-74022800(-) m6A exon//intron       25683224//24981863
chrX:74022813-74022814(-) m6A exon//intron       25683224//24981863
chrX:74022934-74022935(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chrX:74022992-74022993(-) m6A exon//intron       25683224//25412662//24981863//22608085
chrX:74023055-74023056(-) m6A exon//intron       25683224//25412662
chrX:74023115-74023116(-) m6A CDS//exon//intron       25412662//22608085
chrX:74023274-74023275(-) m6A exon//intron       25412662
chrX:74023285-74023286(-) m6A exon//intron       25412662
chrX:74023292-74023293(-) m6A exon//intron       25412662
chrX:74023327-74023328(-) m6A exon//intron       25412662
chrX:74023342-74023343(-) m6A exon//intron       25412662
chrX:74023379-74023380(-) m6A CDS//exon       25412662//22608085
chrX:74023509-74023510(-) m6A CDS//exon       25412662//22608085
chrX:74023576-74023577(-) m6A exon//intron       25412662//25569111//22608085
chrX:74023814-74023815(-) m6A 5'UTR//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m21-1
Interactor2: Irak1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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