Basic Information:

  VIRBase ID:  

VHID00596148

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Hdac2:  NM_008229     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Hdac2
miRBase Accession/Entrez ID	MIMAT0005540	15182
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D10Wsu179//D10Wsu179e//mRPD3//YAF1//Yy1b//Yy1bp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hdac2	chr10:36986383-36986384(+) m6A CDS       24981863//22608085 chr10:36993684-36993685(+) m6A CDS//exon       22608085 chr10:36998052-36998053(+) m6A CDS//intron       25412662//22608085 chr10:36998076-36998077(+) m6A CDS//intron       25412662//22608085 chr10:36998082-36998083(+) m6A CDS//intron       25412662//24981863//22608085 chr10:36998295-36998296(+) m6A exon//intron       25412662 chr10:36998370-36998371(+) m6A exon//intron       25412662//24981863 chr10:36998425-36998426(+) m6A CDS//exon//intron       25683224//25412662//24981863 chr10:36998539-36998540(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:36998550-36998551(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:36998557-36998558(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:36998565-36998566(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:37000383-37000384(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:37000395-37000396(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chr10:37000412-37000413(+) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111 chr10:37001540-37001541(+) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//26404942 chr10:37001581-37001582(+) m6A 3'UTR//exon       25412662//24981863//25569111//26404942 chr10:37001614-37001615(+) m6A 3'UTR//exon       24981863//25569111//26404942 chr10:37001631-37001632(+) m6A 3'UTR//exon       24981863//25569111//26404942 chr10:37001664-37001665(+) m6A 3'UTR//exon       24981863//25569111//26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Hdac2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Hdac2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar