Basic Information:

  VIRBase ID:  

VHID00595762

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Aebp2:  NM_001309436     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Aebp2
miRBase Accession/Entrez ID	MIMAT0005540	11569
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AU023766//B230313N05Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Aebp2	chr6:140622665-140622666(+) m6A 5'UTR       25683224 chr6:140622704-140622705(+) m6A 5'UTR       25683224 chr6:140622784-140622785(+) m6A 5'UTR       25683224//25456834//25412662//25569111 chr6:140622829-140622830(+) m6A 5'UTR       25683224//25456834//25412662//25569111 chr6:140622860-140622861(+) m6A 5'UTR       25683224//25456834//25412662//25569111 chr6:140622924-140622925(+) m6A 5'UTR       25683224//25456834//25412662//25569111 chr6:140622973-140622974(+) m6A 5'UTR       25683224//25456834//24981863//25569111 chr6:140622980-140622981(+) m6A 5'UTR       25683224//25456834//24981863//25569111 chr6:140623046-140623047(+) m6A 5'UTR       25683224//25456834//24981863//25569111 chr6:140623054-140623055(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr6:140623907-140623908(+) m6A CDS//intron       25683224//25412662//24981863//25456834//25569111 chr6:140624152-140624153(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr6:140624331-140624332(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr6:140624340-140624341(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr6:140624962-140624963(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr6:140626897-140626898(+) m6A 5'UTR//intron       25683224 chr6:140626919-140626920(+) m6A 5'UTR//intron       25683224 chr6:140626996-140626997(+) m6A 5'UTR//intron       24981863//25569111//22608085 chr6:140633708-140633709(+) m6A CDS       24981863//25569111 chr6:140633714-140633715(+) m6A CDS       24981863//25569111 chr6:140633760-140633761(+) m6A CDS       24981863//25569111 chr6:140633787-140633788(+) m6A CDS       24981863//25569111 chr6:140633813-140633814(+) m6A CDS       24981863//25569111//22608085 chr6:140633846-140633847(+) m6A CDS       24981863//25569111//22608085 chr6:140633855-140633856(+) m6A CDS       24981863//25569111//22608085 chr6:140638161-140638162(+) m6A exon//intron       25412662//22608085 chr6:140642253-140642254(+) m6A CDS       25412662//22608085 chr6:140642316-140642317(+) m6A CDS       25412662//22608085 chr6:140642329-140642330(+) m6A CDS       25412662//22608085 chr6:140642337-140642338(+) m6A CDS       25412662//22608085 chr6:140643178-140643179(+) m6A exon//intron       25412662//22608085 chr6:140643186-140643187(+) m6A exon//intron       25412662//22608085 chr6:140650787-140650788(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr6:140650811-140650812(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr6:140650821-140650822(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr6:140650940-140650941(+) m6A 3'UTR//intron       24981863//25456834//25569111//22608085 chr6:140651023-140651024(+) m6A 3'UTR//intron       24981863 chr6:140651032-140651033(+) m6A 3'UTR//intron       24981863 chr6:140651055-140651056(+) m6A 3'UTR//intron       24981863 chr6:140652025-140652026(+) m6A 3'UTR//exon//intron       25683224//24981863//25569111 chr6:140652034-140652035(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr6:140652061-140652062(+) m6A 3'UTR//intron       25683224//24981863 chr6:140652112-140652113(+) m6A 3'UTR//intron       25683224//22608085 chr6:140652388-140652389(+) m6A 3'UTR//intron       25412662//24981863 chr6:140652450-140652451(+) m6A 3'UTR//intron       25683224//25412662//24981863 chr6:140653522-140653523(+) m6A 3'UTR//intron       - chr6:140653616-140653617(+) m6A 3'UTR//intron       - chr6:140653777-140653778(+) m6A 3'UTR//intron       25456834//24981863 chr6:140653823-140653824(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:140653921-140653922(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:140654085-140654086(+) m6A 3'UTR//intron       25569111 chr6:140654164-140654165(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:140654191-140654192(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:140654341-140654342(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:140654362-140654363(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:140654403-140654404(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:140654427-140654428(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:140654460-140654461(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr6:140654788-140654789(+) m6A 3'UTR//intron       25683224 chr6:140654793-140654794(+) m6A 3'UTR//intron       25683224 chr6:140654844-140654845(+) m6A 3'UTR//intron       25683224 chr6:140655061-140655062(+) m6A 3'UTR//intron       24981863//25569111 chr6:140655110-140655111(+) m6A 3'UTR//intron       25569111 chr6:140655123-140655124(+) m6A 3'UTR//intron       25569111 chr6:140655143-140655144(+) m6A 3'UTR//intron       25456834 chr6:140677721-140677722(+) m6A 3'UTR       24981863 chr6:140677814-140677815(+) m6A 3'UTR       24981863//25569111 chr6:140677849-140677850(+) m6A 3'UTR       24981863//25569111 chr6:140677864-140677865(+) m6A 3'UTR       24981863//25569111 chr6:140677872-140677873(+) m6A 3'UTR       24981863//25569111 chr6:140677992-140677993(+) m6A 3'UTR       24981863 chr6:140678054-140678055(+) m6A 3'UTR       24981863 chr6:140678079-140678080(+) m6A 3'UTR       24981863 chr6:140678121-140678122(+) m6A 3'UTR       25412662//24981863 chr6:140678128-140678129(+) m6A 3'UTR       25412662//24981863 chr6:140678234-140678235(+) m6A 3'UTR       25412662//24981863//25569111 chr6:140678270-140678271(+) m6A 3'UTR       24981863//25569111 chr6:140678311-140678312(+) m6A 3'UTR       24981863 chr6:140678380-140678381(+) m6A 3'UTR       25683224//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Aebp2	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Aebp2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar